| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A1617 |
|---|
| Symbol | |
|---|
| ID | 4787241 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylibium petroleiphilum PM1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008825 |
|---|
| Strand | + |
|---|
| Start bp | 1745407 |
|---|
| End bp | 1745868 |
|---|
| Gene Length | 462 bp |
|---|
| Protein Length | 153 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640090185 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001020814 |
|---|
| Protein GI | 124266810 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG2867] Oligoketide cyclase/lipid transport protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.441973 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCACG TCAAGAAGTC CGTTCTGCTG TGGTACTCGG CGCAGGAGAT GTACGCACTC
GTCACCGACG TGCCGGCCTA TCCGCAGTTC CTGCCGTGGT GCGACCGCAC CGAGGTGCTC
GAATCGACCG AGCACGGCAT GACGGCCCGC CTGCATCTGG CCTACCACGG CGTCCGCCAC
GCGTTCACCA CCCGCAACGA GCACCAGGCC GGCCGGTCGG TCGTGGTCTC GCTGGTCGAC
GGGCCGTTCT CGCAACTGGA GGGTGTGTGG CAGTTCGTGC CGCTGGGCGC CCCGGCCGAC
GACAGCGCGG CGCCGCGGGC CTGCCGCGTC GAGCTCGACC TGCGCTATGC CTTCAGCAGC
CTCGCGCTGG AAGCGGTGGT GAGCCCGGTG TTCGATCGCA TCGCCAACAC CCTGGTCGAC
TCCTTCGTCA AGCGCGCCGA GCAGGTGCAT GGGCCGCGTT GA
|
|---|
| Protein sequence | MKHVKKSVLL WYSAQEMYAL VTDVPAYPQF LPWCDRTEVL ESTEHGMTAR LHLAYHGVRH
AFTTRNEHQA GRSVVVSLVD GPFSQLEGVW QFVPLGAPAD DSAAPRACRV ELDLRYAFSS
LALEAVVSPV FDRIANTLVD SFVKRAEQVH GPR
|
|---|
| |