| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A1616 |
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| Symbol | smpB |
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| ID | 4787240 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008825 |
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| Strand | - |
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| Start bp | 1744910 |
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| End bp | 1745377 |
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| Gene Length | 468 bp |
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| Protein Length | 155 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640090184 |
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| Product | SsrA-binding protein |
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| Protein accession | YP_001020813 |
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| Protein GI | 124266809 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0691] tmRNA-binding protein |
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| TIGRFAM ID | [TIGR00086] SsrA-binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.823656 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCCATCG CAGACAACAA GAAGGCCCGC TTCAACTACA CCATCGAGGA GCAGTTCGAG
GCCGGCATGG TGCTCGAAGG CTGGGAAGTG AAGGCCATCC GCGCCGGCCA GGTGCAGCTG
ACCGATGGCT ACGTCGTCGT CAAGGACGGC GAGCTGTTCC TGATCGGCTG CCGGATCAAC
CCGCTGCGCA CCGCGTCCAC CCACGTCCAC CCGCAGGCCG ACCGGACCAA GAAGCTGCTG
ATGAAGAAGG ACGAGATCCG TCGTCTGGTC GGCAAGGTCG AGCAGAAGGG CTACACGCTG
GTGCCGCTGA ACCTGCACTA CAAGGGCGGG CGCGTGAAGG CCGACATCGC CCTCGCCAAG
GGCAAGGATC TGCATGACAA GCGCGAGACC GAGAAGAAGC GCGACTGGGA GCGGGAGAAA
GGCCAGTTGA TGCGGCACAA GATCAGCAGC CCCCGCAAGG ACACCTGA
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| Protein sequence | MAIADNKKAR FNYTIEEQFE AGMVLEGWEV KAIRAGQVQL TDGYVVVKDG ELFLIGCRIN
PLRTASTHVH PQADRTKKLL MKKDEIRRLV GKVEQKGYTL VPLNLHYKGG RVKADIALAK
GKDLHDKRET EKKRDWEREK GQLMRHKISS PRKDT
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