| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A1610 |
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| Symbol | |
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| ID | 4787234 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008825 |
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| Strand | - |
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| Start bp | 1737035 |
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| End bp | 1738921 |
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| Gene Length | 1887 bp |
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| Protein Length | 628 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640090178 |
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| Product | thiamine biosynthesis protein ThiC |
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| Protein accession | YP_001020807 |
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| Protein GI | 124266803 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0422] Thiamine biosynthesis protein ThiC |
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| TIGRFAM ID | [TIGR00190] thiamine biosynthesis protein ThiC |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.403186 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGCCC CCGACAAGCT CGCCACCCTG CTCTCGCTGA CACGCGAGCC CTTCCCCGCC
TCGCGCAAGT CCTATCTGCA AGGCTCGCGC AGCGACCTGC GCGTACCGAT GCGCGAAGTG
ACGCTGACCA ACGGCGAGAC CGTCTCGCTG TACGACACCT CGGGTCCGTA CACCGAACCC
GGCGTCGCGA TCGACGTGAG GCGCGGCCTG CCCAGCGTGC GCACGCCCTG GCTCGACGAG
CGTGCCGACA CCGAGGTCTA TGCCGGCCGG CTGCACCAGG CGCTGGACGA CGGCGCGAAG
CACGAGGACC GCGAGGCCGA GCGCATCGAA CAGTTGCGCC TCGACGCCGC AGCGCTGCAG
CGGCCTCCGC GCCGTGCCAG GGCCGGCGCC AACGTCACGC AGATGCACTA TGCGCGCCGC
GGCATCGTCA CGCCCGAGAT GGAGTACGTG GCGCTGCGCG AGAACGGCAA GCGCGAGTGG
ATGCGGGAGT ACCTCGGCGA CGCCCCGCGC GAACAGCGCC TGCGCGGCAA CCCGATGGGT
GCGCAGATCC CGGCCATCGT GACGCCTGAG TTCGTGCGCG ACGAGGTGGC GCGCGGCCGC
GCCATCATCC CGGCCAACAT CAACCACCCC GAAGTGGAGC CGATGGCGAT CGGCCGCAAC
TTCCTGGTGA AGATCAACGC CAACATCGGC AACTCGGCCG TCACGTCGAG CATCGAGGAA
GAGGTGGAGA AGCTGGTGTG GGCGATCCGC TGGGGCGCCG ACAACGTGAT GGACCTCTCC
ACCGGTCGCA ACATCCACAC CACGCGCGAC TGGATCCTGC GCAACTCGCC GGTGCCGATC
GGCACCGTGC CGATCTACCA GGCGCTCGAG AAGGTGGGCG GCGTGGCCGA GGACCTCACC
TGGGCCATCT TCCGCGACAC GCTGATCGAG CAGGCCGAGC AAGGCGTCGA CTACTTCACC
ATCCACGCCG GCGTACGCCT GCCCTTCATC CACCTCACCG CGGACCGCCG CACCGGCATC
GTCTCGCGTG GCGGCTCGAT CATGGCCAAG TGGTGCATCT CGCACCACCG CGAGAGCTTC
ATCTACGAGC ACTTCGAGGA CATCTGCGAC ATCATGAAGG CCTACGACGT GAGCTTCTCG
CTCGGCGACG GCTTGCGCCC CGGCTCGGCC GCCGACGCCA ACGACGAGGC GCAGTTCGCC
GAACTGCGCA CGCTGGGCGA GCTGACCCAG GTGGCCTGGA AGCACGACGT GCAGACCATG
ATCGAAGGCC CGGGCCACGT GCCGATGCAC ATGATCCAGG CCAACATGGA CGAGCAGCTC
AAGCACTGCC ACGAGGCGCC GTTCTACACG CTGGGGCCGC TGACGATCGA CATCGCGCCC
GGCTACGACC ACATCGCCAG CGCCATCGGC GCGGCCATGA TCGGCTGGTT CGGCACCGCG
ATGCTGTGCT ACGTGACGCC CAAGGAACAC CTGGGCCTGC CCGACCGCGA GGACGTGAAG
CAGGGCATCG TCGCCTACAA GATCGCCGCG CACGCGGCTG ATGTCGCCAA GGGTCACCCC
GGCGCTCGCG CCCGCGACGA CGCGCTGTCC AAGGCGCGCT TCGAGTTCCG CTGGATGGAC
CAGTTCAACC TTTCGCTGGA CCCCGACACC GCACGCGACT TCCACGACGA GACGCTGCCC
AAGGACGCCA GCAAGGTGGC GCACTTCTGC TCGATGTGCG GGCCCAAGTT CTGCTCGATG
AAGATCACCC AGGAGGTGCG CGACTACGCC GCGCAGCGCG GCGTCAGCGA GGCGCAGGCG
CTGGGCGCCG GCATGGCCGA GAAGTCGAGC CAGTTCCGGC AGGCCGGCGG CGAGATCTAC
ATCCCGCTCG CCGTCGACAA GGGCTGA
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| Protein sequence | MNAPDKLATL LSLTREPFPA SRKSYLQGSR SDLRVPMREV TLTNGETVSL YDTSGPYTEP
GVAIDVRRGL PSVRTPWLDE RADTEVYAGR LHQALDDGAK HEDREAERIE QLRLDAAALQ
RPPRRARAGA NVTQMHYARR GIVTPEMEYV ALRENGKREW MREYLGDAPR EQRLRGNPMG
AQIPAIVTPE FVRDEVARGR AIIPANINHP EVEPMAIGRN FLVKINANIG NSAVTSSIEE
EVEKLVWAIR WGADNVMDLS TGRNIHTTRD WILRNSPVPI GTVPIYQALE KVGGVAEDLT
WAIFRDTLIE QAEQGVDYFT IHAGVRLPFI HLTADRRTGI VSRGGSIMAK WCISHHRESF
IYEHFEDICD IMKAYDVSFS LGDGLRPGSA ADANDEAQFA ELRTLGELTQ VAWKHDVQTM
IEGPGHVPMH MIQANMDEQL KHCHEAPFYT LGPLTIDIAP GYDHIASAIG AAMIGWFGTA
MLCYVTPKEH LGLPDREDVK QGIVAYKIAA HAADVAKGHP GARARDDALS KARFEFRWMD
QFNLSLDPDT ARDFHDETLP KDASKVAHFC SMCGPKFCSM KITQEVRDYA AQRGVSEAQA
LGAGMAEKSS QFRQAGGEIY IPLAVDKG
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