| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A1594 |
|---|
| Symbol | |
|---|
| ID | 4787000 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylibium petroleiphilum PM1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008825 |
|---|
| Strand | - |
|---|
| Start bp | 1719973 |
|---|
| End bp | 1721928 |
|---|
| Gene Length | 1956 bp |
|---|
| Protein Length | 651 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640090162 |
|---|
| Product | glucose dehydrogenase |
|---|
| Protein accession | YP_001020791 |
|---|
| Protein GI | 124266787 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG4993] Glucose dehydrogenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGATCA GAACCACGGC GCTGCTGACG GCGACGGCCG CTGCGTGCAT CGCTGCAAGT
GCCGCCGAGA CCGGCAACTG GCGCGAGTAC AACGGCGACA AGGCGGGATC CCGCTTCGAG
CCGGGCGTGA ACGTCACGCT GCAGAGCGTG AAGTCGATGA AGGTGGCCTG GCGCGTGCCA
CTGCCCGGCA ACCAGTTGCC GATCGACAAC CCGGAGTTGC GCACCTGGGT CAACCAGTCC
ACGCCGCTGG CGGTCAACGG CGTGCTGTAC TCCAGTTCGC CGCTGGGCAT CGTGACCGCG
CTCGACGGCG CCACCGGCAA GACGCTGTGG ACCTGGGACG GCGGCGGTTG GGCCGACGGC
ACACCGCCGA ACCTGGGCTT CATCAGCCGC GGCGTGACCT ACTGGGAAAA GGGCGAGGAC
CGGCGGCTCT TCGTCGGCAC GCCCGACGCC TACCTCGTCG CACTGAACGC GAAGACCGGC
AAGCCGATCG AGAGCTGGGG TGACAAGGGT CGCATCGATC TGACCAAGGG CCTGCGCCGC
CCGGTCGACC GCTCGCTGGT GAGCCCGACC ACGCCGCCGA TCATCTGCGG CGGACAGGTG
ATCCCCAGCC TCGCCGTCCT CGACTCCTTC GCGATCGGCC GCGACCCGCT GAAGAACCAC
CCGCCCGGCG ACGTGCGCGG CTTCGACCTG ATGACCGGCA AGCAGAGCTG GGTGTTCCAT
GCGCCGCCGC AGAAGGGCGA GCCCGGCAAC GAGACGTGGG AAGGCGACTC GGCGCAGTCG
ACCGGCGGCA TGAACATGTG GACGCGCGCG AGCTGCGACG ACGAGCAGGG GCTGGTCTAC
CTGCCGCTGT CGACGCCGGC GAACGACTTC TACGGCGGCC AGCGCAAGGG CGACGGCCTG
TTCGGCGAGT CGCTGGTGGC GCTGAACGCC AAGACCGGCA AGATCGCGTG GTACTACCAG
ATCGTGCACC ACGGCATCTG GGACTACGAC CTGCCGGCCG CGCCGAACCT GATGGACCTC
ACCGTCGACG GCCGCAAGAT CAAGGCCGCG GTGCAGGTGA CCAAGCAGGG CTTCGTGTTC
GCGTTCGACC GAGTCAACGG CAAGCCGATC TGGCCGATCG AGGAGAAGGC GGTGCCGCAG
TCCACCGTGC CCGGCGAGAA GTCGTCGCCG ACGCAGCCCT TCCCCAGCAA GCCGGCGCCC
TTCGTGCAGC AGGGCGTAAC CGAGGACGAC CTGATCGACC TGACGCCCAA GCTGAAGGAG
GAGGCGAAGA AGATCCTGGC GCGCTACAAC TACGGCCCGC TCTACTTCCC GCCGACGCTC
GACAAGGCCG GCACGCTGGA AGTGCCGGGC GTGCTCGGCG GTGCCAGCTG GGTGGGCGCC
GCGCACAACC CGAAGTCCAA CGTGCTCTAC GTGCCCTCGT TCACGATCCC GTTCGGCATC
AAGCTGAAGA AGGGGACGAC CGGCCTGTAC GACTACACCG GCACCTGGGC CGGTGTCGGT
GGTCCGGACG GGCTGCCGCT GTTCAAGCCG CCGTTCAGCA CCGTCACCGC GATCGACATG
AACACCGGCA AGCACCTGTG GCGCATCCCG GCCGGCCGCG GCCCGGTCGA TCACCCGGCC
CTGAAGGACC TGAAGCTCGA CCGCGTGGGT GTGCCGCGCC AGAGCCACAT CGCTCTGACC
GAGAACGTGC TGTTCCTCGC ACCGGAGGGC ACCAACAGCG TCATCGGCCT GTCGGCACGC
GGCAACGCGC TGATCACGCA GGCCACGAAG GAGGAGCCCG AGCCCTTCCT CTACGCGCAT
GACGCGAAGA CCGGCGCGCT GGTTGGCGAG GTCCGTCTGC CCGGCGGCGT GTTCGGCAAC
CTGATGACCT ACTCCGCCGG CGGCAAGCAG TTCGTCGTCG CGCCGATCGG GGGAGCCGGC
CTCCCGGCCG AACTGGTGGC CGTGCAGGTG AACTGA
|
|---|
| Protein sequence | MSIRTTALLT ATAAACIAAS AAETGNWREY NGDKAGSRFE PGVNVTLQSV KSMKVAWRVP
LPGNQLPIDN PELRTWVNQS TPLAVNGVLY SSSPLGIVTA LDGATGKTLW TWDGGGWADG
TPPNLGFISR GVTYWEKGED RRLFVGTPDA YLVALNAKTG KPIESWGDKG RIDLTKGLRR
PVDRSLVSPT TPPIICGGQV IPSLAVLDSF AIGRDPLKNH PPGDVRGFDL MTGKQSWVFH
APPQKGEPGN ETWEGDSAQS TGGMNMWTRA SCDDEQGLVY LPLSTPANDF YGGQRKGDGL
FGESLVALNA KTGKIAWYYQ IVHHGIWDYD LPAAPNLMDL TVDGRKIKAA VQVTKQGFVF
AFDRVNGKPI WPIEEKAVPQ STVPGEKSSP TQPFPSKPAP FVQQGVTEDD LIDLTPKLKE
EAKKILARYN YGPLYFPPTL DKAGTLEVPG VLGGASWVGA AHNPKSNVLY VPSFTIPFGI
KLKKGTTGLY DYTGTWAGVG GPDGLPLFKP PFSTVTAIDM NTGKHLWRIP AGRGPVDHPA
LKDLKLDRVG VPRQSHIALT ENVLFLAPEG TNSVIGLSAR GNALITQATK EEPEPFLYAH
DAKTGALVGE VRLPGGVFGN LMTYSAGGKQ FVVAPIGGAG LPAELVAVQV N
|
|---|
| |