Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpe_A1576 |
Symbol | |
ID | 4786982 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylibium petroleiphilum PM1 |
Kingdom | Bacteria |
Replicon accession | NC_008825 |
Strand | - |
Start bp | 1701503 |
End bp | 1702285 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640090144 |
Product | putative D-beta-hydroxybutyrate dehydrogenase (BDH) oxidoreductase protein |
Protein accession | YP_001020773 |
Protein GI | 124266769 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | [TIGR01963] 3-hydroxybutyrate dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTGAACA GCAAGACCGC ACTCGTCACC GGCTCGACCA GCGGTATCGG CCTCGGCATC GCGATCGTCC TGGCGCGCCA GGGCGCGAAC ATCATCCTCA ACGGCTTTGG CGACAGCGAG GCACCGAAGG CGGAGGTGCT GGCGGCCGGC AAGGCCCACG GCATCAAGGT GGGCTACCAC GGCGCCGACA TGAGCAAGGC AGCCGAGATC GAGGCCCTGA TGGCCTACGC GGCGGCCGAT TTCGGCGGCG TCGACATCCT GGTCAACAAC GCCGGCATCC AGCACGTGGC CAACGTCGAG GACTTCCCCG TCGCCAAGTG GGACGCGATC ATCGCGATCA ACCTGAGCTC GGCCTTCCAC ACCACGCGCC TGGCGATCCC GCAGATGCGC AGGAAGAACT GGGGCCGCGT GCTCAACATC GCCTCAGCCC ACGGCCTGGT GGCCTCGGCC GGCAAGAGCG CCTACGTGGC CGCCAAGCAC GGGCTGGTGG GCTTCACCAA GTCGATCGCG CTCGAGACCG CGACCACCGG CATCACCGTC AACGCGATCT GCCCGGGCTG GGTGTTGACG CCGCTGGTGC AGAAGCAGAT CGACGACCGC TCGGCCCGCG AGGGCATCCC GGTCTTGCAG GCCGAGAAGG AGCTGCTGGG CGAGAAGCAG CCTTCGCTGC AGTTCACCAC GCCCGAGCAG TTGGGCGAGC TGGCCGTCTT CCTGTGTTCG GACGCCGCGT CCAACGTGAA GGGCCAGGCG TGGGCGATGG ACGGTGGGTG GACGGCGCAG TAG
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Protein sequence | MLNSKTALVT GSTSGIGLGI AIVLARQGAN IILNGFGDSE APKAEVLAAG KAHGIKVGYH GADMSKAAEI EALMAYAAAD FGGVDILVNN AGIQHVANVE DFPVAKWDAI IAINLSSAFH TTRLAIPQMR RKNWGRVLNI ASAHGLVASA GKSAYVAAKH GLVGFTKSIA LETATTGITV NAICPGWVLT PLVQKQIDDR SAREGIPVLQ AEKELLGEKQ PSLQFTTPEQ LGELAVFLCS DAASNVKGQA WAMDGGWTAQ
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