Gene Mpe_A1565 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpe_A1565 
Symbol 
ID4785615 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylibium petroleiphilum PM1 
KingdomBacteria 
Replicon accessionNC_008825 
Strand
Start bp1689128 
End bp1690348 
Gene Length1221 bp 
Protein Length406 aa 
Translation table11 
GC content69% 
IMG OID640090133 
Producthypothetical protein 
Protein accessionYP_001020762 
Protein GI124266758 
COG category[I] Lipid transport and metabolism 
COG ID[COG4553] Poly-beta-hydroxyalkanoate depolymerase 
TIGRFAM ID[TIGR01849] polyhydroxyalkanoate depolymerase, intracellular 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.185575 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGTACC AGGCCTACCA GAACCACACC GATCTGCTGG CGCCGCTCCA GACGGCGGCC 
AGTACCGCAG CGAGCTACCT CAGCCACGAG TGGTTCGTCC TGAAGCAGCT GCCGGCGGTG
CGCAAGCTGG CTGCCGCCTG CGAGGTGTTC TCGCTCGCCA GGCTGACGCA CCAGCGGCCC
GAGTTCCGCA TCAGCTCCGT GCGGGTCGGC GAGCGCGAGC TGAAGGTGCG CGAGGAGGTG
GTGACCAGCA CGCCCTTCGC CACCCTGCTG CGCTTCGTGC GCGAGGACGC TCCGGCCGAC
CAGCCGCGCG TGCTGATCGC CGCGCCGCTG TCGGGCCACT TCGCCACGCT GCTGCGCGAC
ACGGTGCGCA CGATGATGGC CGACCACGAC GTCTACATCA CCGACTGGCA CAACGCCCGC
CATGTGCCGC TGGCCGAGGG GCCGTTCGGC CTGGACGAGT ACATCGACCA CCTGATCCTG
TTCCTGGAGA CCATAGGCCC CGGCTCGCAC CTGATGGCGA TCTGCCAGCC CTGCGTGCCG
GCGCTGGCCG CGGTGGCGCT GATGAGCGAG GACGACAACC CGGCGCAGCC GCGCAGCATG
TCGCTGATGG CCGGCCCGAT CGACTGCCGC ATCAACCCGA CCGAGGTGAA CAAGCTCGCG
ACCAGCAAGC CGATCGAGTG GTTCGAGAAG AACCTGGTAC ACGACGTGCC GCTGCGCTAT
GCCGGCGCGA TGCGGCGCGT GTACCCCGGC TTCCTGCAGC TCACCGCCTT CATGAGCATG
AACCCGGACC GGCACCGCAA GGCCTTCGCC GACCTGTACC ACCACATCGC CACCGGCGAC
ATCGAGAAGG CCGAGGCCAC GCGGCAGTTC TACGAGGAGT ACTTCGCCGT CAACGACCTG
GCCGCCGAGT TCTATCTGGA GACCGTGAAA CTGGTGTTCC AGGACTACGC GCTGGCGCAG
GGCGACCTGA ACTACCGCGG CCGCACCGTC GACACCCGAG CGATCCGCCG CACCGCGCTC
TTCACCGTCG AGGGCGAGCG CGACGACATC TGCTCGATCG GCCAGACCGT CGCCGCGCAC
GACCTGTGCG GTGGCCTCGC CCCCTTCCGC AAGACCCACC ACGTGCAGCT CGGCGTGGGC
CACTACGGCG TGTTCAGCGG CCGGCGCTGG CAGCAGCAGA TCTACCCACG GGTGCGCGAG
CTGATCCACG TGAGCCAGTG A
 
Protein sequence
MMYQAYQNHT DLLAPLQTAA STAASYLSHE WFVLKQLPAV RKLAAACEVF SLARLTHQRP 
EFRISSVRVG ERELKVREEV VTSTPFATLL RFVREDAPAD QPRVLIAAPL SGHFATLLRD
TVRTMMADHD VYITDWHNAR HVPLAEGPFG LDEYIDHLIL FLETIGPGSH LMAICQPCVP
ALAAVALMSE DDNPAQPRSM SLMAGPIDCR INPTEVNKLA TSKPIEWFEK NLVHDVPLRY
AGAMRRVYPG FLQLTAFMSM NPDRHRKAFA DLYHHIATGD IEKAEATRQF YEEYFAVNDL
AAEFYLETVK LVFQDYALAQ GDLNYRGRTV DTRAIRRTAL FTVEGERDDI CSIGQTVAAH
DLCGGLAPFR KTHHVQLGVG HYGVFSGRRW QQQIYPRVRE LIHVSQ