Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpe_A1565 |
Symbol | |
ID | 4785615 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylibium petroleiphilum PM1 |
Kingdom | Bacteria |
Replicon accession | NC_008825 |
Strand | - |
Start bp | 1689128 |
End bp | 1690348 |
Gene Length | 1221 bp |
Protein Length | 406 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640090133 |
Product | hypothetical protein |
Protein accession | YP_001020762 |
Protein GI | 124266758 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG4553] Poly-beta-hydroxyalkanoate depolymerase |
TIGRFAM ID | [TIGR01849] polyhydroxyalkanoate depolymerase, intracellular |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.185575 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGTACC AGGCCTACCA GAACCACACC GATCTGCTGG CGCCGCTCCA GACGGCGGCC AGTACCGCAG CGAGCTACCT CAGCCACGAG TGGTTCGTCC TGAAGCAGCT GCCGGCGGTG CGCAAGCTGG CTGCCGCCTG CGAGGTGTTC TCGCTCGCCA GGCTGACGCA CCAGCGGCCC GAGTTCCGCA TCAGCTCCGT GCGGGTCGGC GAGCGCGAGC TGAAGGTGCG CGAGGAGGTG GTGACCAGCA CGCCCTTCGC CACCCTGCTG CGCTTCGTGC GCGAGGACGC TCCGGCCGAC CAGCCGCGCG TGCTGATCGC CGCGCCGCTG TCGGGCCACT TCGCCACGCT GCTGCGCGAC ACGGTGCGCA CGATGATGGC CGACCACGAC GTCTACATCA CCGACTGGCA CAACGCCCGC CATGTGCCGC TGGCCGAGGG GCCGTTCGGC CTGGACGAGT ACATCGACCA CCTGATCCTG TTCCTGGAGA CCATAGGCCC CGGCTCGCAC CTGATGGCGA TCTGCCAGCC CTGCGTGCCG GCGCTGGCCG CGGTGGCGCT GATGAGCGAG GACGACAACC CGGCGCAGCC GCGCAGCATG TCGCTGATGG CCGGCCCGAT CGACTGCCGC ATCAACCCGA CCGAGGTGAA CAAGCTCGCG ACCAGCAAGC CGATCGAGTG GTTCGAGAAG AACCTGGTAC ACGACGTGCC GCTGCGCTAT GCCGGCGCGA TGCGGCGCGT GTACCCCGGC TTCCTGCAGC TCACCGCCTT CATGAGCATG AACCCGGACC GGCACCGCAA GGCCTTCGCC GACCTGTACC ACCACATCGC CACCGGCGAC ATCGAGAAGG CCGAGGCCAC GCGGCAGTTC TACGAGGAGT ACTTCGCCGT CAACGACCTG GCCGCCGAGT TCTATCTGGA GACCGTGAAA CTGGTGTTCC AGGACTACGC GCTGGCGCAG GGCGACCTGA ACTACCGCGG CCGCACCGTC GACACCCGAG CGATCCGCCG CACCGCGCTC TTCACCGTCG AGGGCGAGCG CGACGACATC TGCTCGATCG GCCAGACCGT CGCCGCGCAC GACCTGTGCG GTGGCCTCGC CCCCTTCCGC AAGACCCACC ACGTGCAGCT CGGCGTGGGC CACTACGGCG TGTTCAGCGG CCGGCGCTGG CAGCAGCAGA TCTACCCACG GGTGCGCGAG CTGATCCACG TGAGCCAGTG A
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Protein sequence | MMYQAYQNHT DLLAPLQTAA STAASYLSHE WFVLKQLPAV RKLAAACEVF SLARLTHQRP EFRISSVRVG ERELKVREEV VTSTPFATLL RFVREDAPAD QPRVLIAAPL SGHFATLLRD TVRTMMADHD VYITDWHNAR HVPLAEGPFG LDEYIDHLIL FLETIGPGSH LMAICQPCVP ALAAVALMSE DDNPAQPRSM SLMAGPIDCR INPTEVNKLA TSKPIEWFEK NLVHDVPLRY AGAMRRVYPG FLQLTAFMSM NPDRHRKAFA DLYHHIATGD IEKAEATRQF YEEYFAVNDL AAEFYLETVK LVFQDYALAQ GDLNYRGRTV DTRAIRRTAL FTVEGERDDI CSIGQTVAAH DLCGGLAPFR KTHHVQLGVG HYGVFSGRRW QQQIYPRVRE LIHVSQ
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