Gene Mpe_A1562 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpe_A1562 
Symbol 
ID4785612 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylibium petroleiphilum PM1 
KingdomBacteria 
Replicon accessionNC_008825 
Strand
Start bp1684305 
End bp1686905 
Gene Length2601 bp 
Protein Length866 aa 
Translation table11 
GC content72% 
IMG OID640090130 
Productputative transmembrane protein 
Protein accessionYP_001020759 
Protein GI124266755 
COG category[S] Function unknown 
COG ID[COG0392] Predicted integral membrane protein
[COG2898] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.354089 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGAGC CCAGCCCCGC GTCGCTGCTC GGACCCCGAC CGCCCGCGCC CTGGCTGGGC 
GAGTGGTGGC CGCGCCTGCG GCCCTGGGTG CTCACGACAC TGGCCATGCT GCTGGCGGGT
GCCGTGGCGC TGGCGCTGCA GGGCCTGCTG CGCGAGGTGC GCTATGCCGA CGTGATGGCC
GCGATGCACG CCACGCCGCC GTCGGACATC GCGTTCGCGC TGCTCGCCAC CGCGGCGAGC
TACCTCGCGC TGGCCGGGTA TGACGCGTCG GCGCTGGTCT ATGCAGGCGC CAGGGTCGGG
CGCAGCACGG TGCTGCTGAC CTCGTTCGTC GCCTACGCGC TGGCCAACAC CATCGGCCTC
GGCCCGCTTA CCGGCGGCGC GGTGCGGATG CGGCTGTACG CCGCGGCCGG ACTGGCGCCG
CCGCAGATCG CGCGGGTGAT CGCCTTCAAC GCTGCCGCGT TCACGCTGGG CATCACCGCC
TTCGGCGCGC TCGGGCTGCT GTGGGGGGCC GACGACGTGG CGTCGCTGCT GCACACGCGG
CCAGGAGGCT TGCGCGCCGG CGCCGCGGTG CTGCTGCTGG CGCTGGCTGT CTTTCTGGTG
CTGTGCCTGC GGCAGCGCAC GCTGAATGTG GGCCCGCGCT GGACGCTGCG GCTGCCGTCG
GCGGGCCTGG CGTTGCGCCA GCTGGTGATC TCGGCGCTCG AGCTCGGCGC GTCGGCCGCG
GCACTGTGGT TCCTGCTGCC CGACGACCGC ATCGCGCTGC CGACCTTCAT GGCCTTCTAT
GCCATCGCGA TCACGGCCGG CATCCTGAGC CATGTGCCAG GCGGCGTGGG CGTGTTCGAG
GCGGTGATGC TGCTGGCCAG CGGCGCGCAC GTGCCGACCG AGGCGATGCT GGGCGCCTTG
CTGCTCTACC GCGGTCTCTA CTACGTGCTG CCGCTGGTGC TCGCCACGGC GCTGCTGGCG
TCCTACGAAC TGCGCTCCGG CGTGGCCGCG CCGGTCGGCC GTCTGGCGGT GCGCCTCAGT
CCTCGGTTGA TGGCTGCGCT GACGCTGGTG GCCGGCCTGT GGCTGCTGGT CTCGGGCGTC
ACGCCGGTGA CCGAGGATGC GCGGCAGATC CTCGCAGCGC TCGACCTGCC GCTGCCGCTG
ATCGAGGCCT CGCATTTCCT CGGTAGCGTC GCCGGCCTGG GGTTGCTGCT GGTCGCGCGC
GGGCTGCTGC ACCGGCTCGA CGCGGCCTGG TGGGCGGCGC TGGTGCTGGC GGTCGTGGCG
GCGGTGCTGG CGCTGCCCAA GGGCATTGCG CTGCACGAGG CGGCGCTGCT GTCGACGCTG
GCGCTGCTGC TGCTGATCTC GCGCCGGCAG TTCGACCGCC GCTCCTCGCT GTTCGCGCAG
CGTCTCGAGC CCGGGTGGCT GCTGGCGTTG GGCGGCGTGA TCGCCGCCTG CGTGTGGGTG
CTGTTCTTCG CCTATCAGGA GGTCGCCTAC AGCAACCGGC TGTGGTGGCA GTTCGAGCTC
GACGCGCATG CGCCGCGCTC GCTGCGCGCG CTGATGGGCG TGGCATTGAT CGGCCTGGCG
TTCGGCCTCT GGCAGTTGCT GCGCCCGCCG GCCGGCGGCG CGGCGCCGGC CACGGCCGAG
GAGATCGCGC GCGCGGCGGC GGTGGTGCGG AGCAGCCCGT CGTCCGACGG CTGCTATGCG
CTGGTCGGCG ACAAGCACCT GCTGTTCTCG CCGTCGGGCC GCAGCTTCCT GATGTTCGGC
AAGCAGGGCC GCTCCTGGGT GTCGCTGTTC GGCCCGATGG GTGACGCGCG CGAGTGGCCC
GACCTGGTGT GGCGCTTCGT CGAACTGGCG GCGGCGCATG GAGGCCGCGC GGCCTTCTAC
CAGGTCCGGC CGGTCGCGCT GCCGCTCTAC CTGGACTGCG GCCTGCAGGC CTTCAAGCTG
GGCGAGCATG CGCACGTCAC CTTGCCCGAC TTCGATCTCA AGGGTGCCAA GCGCGCCAAC
CTGCGCTCCG GCGTGAACCG CGGGGAGCGC GAGGGCCTGA GCTTCGAGGT GCTGCCGCCG
GCGGCGGTGG GCGCGGCGCT GCCGGAACTG CACGCCGTGT CCGATGCCTG GCTCGGCCAG
CAGAAGTCGC GCGAGAAGGG CTTCTCGGTC GGCCGCTTCG ACGAGCGCTA CCTGCAGCAA
CTGCCGGTCG CCGTGGTGCG GCGCGAAGGC CGCATCATCG CTTTCGCCAA CCTGCTAGCG
ACCGACGCGA AGGACGAGGC CAGCATCGAT TTGATGCGCC ACCTGCCGGA GTCGCCGCCC
GGCACGATGG ACTTCCTGTT CGCCAAGATC ATGCTGTACC TGCAGGCCCA GGGCTACCAG
CGCTTCGGCC TGGGCATGTC GCCGATGGCC GGCATGGCCG AACGGCGCCG CGCGCCGCGC
TGGCAGCGGC TGGGGCGGCT GCTGTTCGAG CACGGCGAGC GCTTCTACAA CTTCCGCGGC
CTGCACAGGT TCAAGGACAA GTTCGAGCCG GTCTGGGAGG CGCGCTACCT AGCCGCACCC
GGCGGCGTGG CGCCGCTGTT CGTGCTGGTC GACGTGGCCG CATTGATTGG CGGCGGCGTC
AAGGGCGTGA TCGCCAAATG A
 
Protein sequence
MTEPSPASLL GPRPPAPWLG EWWPRLRPWV LTTLAMLLAG AVALALQGLL REVRYADVMA 
AMHATPPSDI AFALLATAAS YLALAGYDAS ALVYAGARVG RSTVLLTSFV AYALANTIGL
GPLTGGAVRM RLYAAAGLAP PQIARVIAFN AAAFTLGITA FGALGLLWGA DDVASLLHTR
PGGLRAGAAV LLLALAVFLV LCLRQRTLNV GPRWTLRLPS AGLALRQLVI SALELGASAA
ALWFLLPDDR IALPTFMAFY AIAITAGILS HVPGGVGVFE AVMLLASGAH VPTEAMLGAL
LLYRGLYYVL PLVLATALLA SYELRSGVAA PVGRLAVRLS PRLMAALTLV AGLWLLVSGV
TPVTEDARQI LAALDLPLPL IEASHFLGSV AGLGLLLVAR GLLHRLDAAW WAALVLAVVA
AVLALPKGIA LHEAALLSTL ALLLLISRRQ FDRRSSLFAQ RLEPGWLLAL GGVIAACVWV
LFFAYQEVAY SNRLWWQFEL DAHAPRSLRA LMGVALIGLA FGLWQLLRPP AGGAAPATAE
EIARAAAVVR SSPSSDGCYA LVGDKHLLFS PSGRSFLMFG KQGRSWVSLF GPMGDAREWP
DLVWRFVELA AAHGGRAAFY QVRPVALPLY LDCGLQAFKL GEHAHVTLPD FDLKGAKRAN
LRSGVNRGER EGLSFEVLPP AAVGAALPEL HAVSDAWLGQ QKSREKGFSV GRFDERYLQQ
LPVAVVRREG RIIAFANLLA TDAKDEASID LMRHLPESPP GTMDFLFAKI MLYLQAQGYQ
RFGLGMSPMA GMAERRRAPR WQRLGRLLFE HGERFYNFRG LHRFKDKFEP VWEARYLAAP
GGVAPLFVLV DVAALIGGGV KGVIAK