| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A1555 |
|---|
| Symbol | |
|---|
| ID | 4785605 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylibium petroleiphilum PM1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008825 |
|---|
| Strand | - |
|---|
| Start bp | 1677758 |
|---|
| End bp | 1678618 |
|---|
| Gene Length | 861 bp |
|---|
| Protein Length | 286 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 640090123 |
|---|
| Product | AraC family transcriptional regulator |
|---|
| Protein accession | YP_001020752 |
|---|
| Protein GI | 124266748 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCAAGAC CGTCCAGCGC CCGCATCAAA CCCGCCTCGA CCAGCGTCGG CCCGCTGACG
CCGCACCTGT TCACCCCCAC CGCCGAGCGC CCGCTGCGCG CCAAGCAGCA CACGCTGGCC
ACCGACACCC GGGTGGCGCC GCACAGTCAT GCCTGGGCCC AGCTCGCTTG GTCGGCCACC
GGCGTGATGC GGCTGACCGC CGAGCGCGGC ACCTATCTCG TCCCACCCTC GCGTGCGGTG
TGGGTACCGC CCGGCATCGA GCACGCGATC ACCGTGGTGG AGACGGCCGA GCTGCGCACG
CTGTACCTGC ACCAGCGCCC CGGCCGCTGC GGGCCGCAGC GCAGCGACAC GGTCGGCAGC
GACTGGCGGC ACTGCCGGGT GCTCGAGGTG TCGGAACTGC TGCGCGCGCT GATGCTGGCG
CTGCCGACCA ACCCGGACGG TGCATCACCG AGCGCAGACG AACTGGCGCG TGAGAAGCTG
ATCGCCCCGC TGCTGGCCGA CGAATTGAAG CGCGCCGCGC CGGTGCCGTT GGGCGTCGCA
CTGCCGCAGG ACAAGCGGCT GCGTGCGCTG TGCGAAGCGG TGCTCGACGA CCCGACGCGC
CACGAGACGC TGGCCGACTG GTCGCGCGAC GTCGGTGCCA GCGAGCGCAC GGTGGCGCGG
CTGTTCCGCC AGGACCTGGG CACGAGCTTC GTGCAGTGGC GCCAGCAGGT GCTGCTGGCG
CGCGCGCTGT CGCTGGCGGC GCGTGGCACG CCGATGGGCC AGATCGCCAC CGAACTGGGC
TACGCCAGCC CCAGCGCCTT CAGCGCGATG GTGCGGCGCT CGGTCGGAGC GCCGCCGAGT
CGCTTCTTCG CGTCGGCTTG A
|
|---|
| Protein sequence | MPRPSSARIK PASTSVGPLT PHLFTPTAER PLRAKQHTLA TDTRVAPHSH AWAQLAWSAT
GVMRLTAERG TYLVPPSRAV WVPPGIEHAI TVVETAELRT LYLHQRPGRC GPQRSDTVGS
DWRHCRVLEV SELLRALMLA LPTNPDGASP SADELAREKL IAPLLADELK RAAPVPLGVA
LPQDKRLRAL CEAVLDDPTR HETLADWSRD VGASERTVAR LFRQDLGTSF VQWRQQVLLA
RALSLAARGT PMGQIATELG YASPSAFSAM VRRSVGAPPS RFFASA
|
|---|
| |