| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A1532 |
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| Symbol | |
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| ID | 4783550 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008825 |
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| Strand | - |
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| Start bp | 1650089 |
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| End bp | 1653388 |
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| Gene Length | 3300 bp |
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| Protein Length | 1099 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640090099 |
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| Product | DNA polymerase III, alpha subunit |
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| Protein accession | YP_001020729 |
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| Protein GI | 124266725 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0587] DNA polymerase III, alpha subunit |
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| TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0291245 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.633763 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGCAAC CAGCCCATCC CAAGACGCCG CAGCCGGCGT CGCCTCCGCC GCCGCCGCTG
CACTGGACGC GACCCGGGCT GCCGGCCTAC GCGGAGCTGC ACTGCCGCTC GAACTTCAGC
TTCCTGACCG GCGCCTCGCA CCCACAGGAG TTGGTGGAGC GCGCCGCCCA GCTCGGCTAT
GCGGCGATCG CGATCACCGA CGAGTGCTCG GTGGCCGGCG TGGTGCGGGC GCATGCGGCG
CTGAAGCGGC TGCGCGAGAA CGGCAACCCG CCGTTGCCGG CCCTGATCAT CGGTAGCGAG
TTCACGCTCG CGGCCTCGCC CACCGCACCG GGCTGCCGCC TGGTGCTGCT GGCGAAGAAC
CGCGAAGGCT ATGCCCAGAT CTGTGGTCTC ATCACGCTCG GTCGCGGCCG CAGCGCCAAG
GGGCACTACC AACTGAGCGT CGACGACCTC GATGCGCTGC TGGCCGGCCA GGGCCATGCC
GCCGGCGTGC CCGACTGCCT GGCGCTGCTG ATCCCACGCC GCGACGAGCC TCACGCCACC
CTGCTCGCGC AGGCCCGTTG GCTGGCGGGC CGCTGCGGCG AGCGCGCCTC GATCGCGGTC
GAGCTGCTGC GCTGGGCCGA CGACGAGTCC TTCGTGGAGC GCCTGCTCGA CGCATCGGCC
GCCTCCGGCC TGCCACTGGC GGCGGCGGGC GACGTGCTGA TGCACGTGCG CTCGCGCAAG
CCGCTGCAGG ACACGCTGAC CGCGATCCGC CTGAAGCGCC GCGTCGCCGA CTGCGGCTAC
GCGCTGATGC GCAACGCCGA GCAGCACCTG CGCTCGCGGC TGGCGCTGGC GCAGCTCTGC
CGTCCCGAGT GGCTGCAGCG CAGCGTGGAC CTCGCGCGGG CCTGCGACTT CTCGCTGGAG
CAGCTGAAGT ACGAGTATCC GGACGAGATC GTGCCGGCCG GCGAGACGGC CAGCAGCCAC
CTGCGGCGCC TGACCGAGGA AGGGGCCTGC GTGCGCTATC CCGGCGGCGT GCCTGGCATG
GTGCAGGCGC AGATCGAACA CGAGTTCGCG CTGATCTTCC GCAAGCGCTA CGAGGCCTTC
TTCCTCACCG TTCACGACGT GGTGCGCTTC GCCCGCTCCG AGGGCATCCT GTGCCAGGGT
CGCGGCTCGG CCGCCAATTC GGCGGTCTGC TACTGCCTGG GCATCACCGA GGTCGACCCG
ACGCAGACCC CACTGCTGTT CGAGCGCTTC ATCAGCGAGG AGCGCGGTGA GGCGCCCGAC
ATCGACGTCG ACTTCGAACA CGAGCGGCGC GAGGAAGTCA TCCAGTACAT CTACGGCAAG
TACGGCACGC ACCGCACCGC ACTGGCCGCC GCACTGGCGA CCTACCGCGT GCGCGGTGCG
GTGCGCGAGG TCGGCAAGGC GTTGGGGCTG GACGGGCAGC GCATCGACCG CCTCGCGAAG
AGCCACCAGT GGTTCGACGG GCATGAGGCT CTGCCCGCCC GGCTGGTCGA GGCCGGCTTC
GATCCGGACG CCCCGGTCAC CCGGCAGTGG CTGGCACTGA GCGCCGCGCT GATCGGCTTT
CCGCGGCACC TGTCGCAGCA CGTCGGCGGA TTCGTCATCG CGCGGGACGC GCTGTCGCGC
CTGGTGCCGA TCGAGAACGC CGCGATGAAG GACCGCCGCG TGATCCAGTG GGACAAGGAC
GATCTTGAGT CGCTGGGGCT GCTGAAGGTC GACGTGCTGG CGCTGGGCAT GCTGAGTGCG
CTGAAGCGCG CGCTCGCGCT GATCACCGAC TGGCGCGGCC CGCCGCCCGG CGCCAACGGC
GGCGCACCCA TATCCCCGTC ATGGCGGATG CAGGACATCC CGCGCGATGA CATCGCCACC
TACGAAATGA TCCAGGAAGC TGACACCGTG GGCGTGTTCC AGATCGAGAG CCGGGCCCAG
CAGAGCATGC TGCCTCGCTT GAAGCCAAGT GAGTTCTACG ACCTCGTGGT GCAGGTCGCG
ATCGTGCGGC CGGGCCCGAT CAGCGGCGGC ATGGTGCATC CCTACCTGAA GCAGCGTGAT
CTGCAGCGCC GGGGCCTGCG CCCGCCACCG GCCTACCCAG CGCTCGAGCA GGCGCTCGAG
CGCACGCTGG GCGTTCCGAT CTTCCAGGAG CAGGTGATGC AGATCTGCAT GATCGCGGCC
GATTTCAGCG GCGGCGATGC CGACGAACTG CGCCGCGCGA TGGCGGCCTG GAAACGCAAG
GGCGGCTTGC AGCAATTCCA CCAGCGCATC GTCGGTCGCA TGGTGGAAAA GAACTACGAC
CGCGAGTTCG CCGAGCGCAT CTTCCAGCAG ATCAAGGGCT TCGGCGAGTA CGGCTTCCCG
GAGAGCCACG CCTACAGCTT CGCGCTGCTG GCCTACCTGA GCGCCTGGCT CAAGTGCCAC
GAGCCGGCGA TCTTCCTGGC CGCGCTGCTG AACTCGCAAC CGATGGGCTT CTACGCACCG
TCGCAGCTGG TCCAGGACGC ACGGCGCCAC GCGGTCGAAG TGCGCCCGGT CGACGTGGGC
CACAGCGGCT GGGACTGCAC GCTCGAGCCG GCGTCACCGG GCAGCACGCC CTGCGCGGCA
CGCTCGCTGC AGCCCGCCGT GCGCCTGGGG CTGCGCCTCG TCTCCGGCTT CAGCGAGGCG
GCCGCCGACC GCATCGTGGC TGCCCGCGCT GTGTCGACAT TCGCCAGCCT CGACGACCTG
GCGCGGCGCG CCGGGCTCGA TCCCCAGGCC CTGCAGGTGC TGGCCCGCGC CGACGCACTG
CAGAGCCTGG CCGGCCACCG CCGGCAACAG GCGTGGCATG CGAGTGGCCA GCCCCGCCGC
ACCGCCCTGC TCGCCGGTGC GACGCATCGC GAAGACCCGC TCGTCCTGCC CGCGCCGCCC
GAGGCCGAGG AGATCACGCT CGACTACGCC AGCACCCAGC TCACGCTGCG CCGCCATCCG
CTGGCGCTGC TGCGTCCGCG ACTCGTACAG CGTGGCTGGC GCAACGCGCG GGAGCTCGGT
GCCCTGAAGG ATGGCTGCCG CGTCTGGGCC TGCGGCATCG TCGTCGGCCG CCAGCAGCCC
GAGACCGCCA AGGGCACGAT CTTCGTCACG CTGGAAGACG AGACCGGCTC GGTCAACGTG
ATCGTCTGGA AGGGCGTGCG CGAGCGCTTC CGCCAGGCGC TGCTCGCCTC ACGCCTGCTG
GCCGTGGCCG GGGAATGGCA GCGCTCGCCG GAAGGGGTGA CGCACCTGCT GGCGCGGCGG
CTGGTCGACA TGACGCCCTG GCTGGGCCGG CTGGCGACGA GTTCGCGCGA TTTCCACTGA
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| Protein sequence | MPQPAHPKTP QPASPPPPPL HWTRPGLPAY AELHCRSNFS FLTGASHPQE LVERAAQLGY
AAIAITDECS VAGVVRAHAA LKRLRENGNP PLPALIIGSE FTLAASPTAP GCRLVLLAKN
REGYAQICGL ITLGRGRSAK GHYQLSVDDL DALLAGQGHA AGVPDCLALL IPRRDEPHAT
LLAQARWLAG RCGERASIAV ELLRWADDES FVERLLDASA ASGLPLAAAG DVLMHVRSRK
PLQDTLTAIR LKRRVADCGY ALMRNAEQHL RSRLALAQLC RPEWLQRSVD LARACDFSLE
QLKYEYPDEI VPAGETASSH LRRLTEEGAC VRYPGGVPGM VQAQIEHEFA LIFRKRYEAF
FLTVHDVVRF ARSEGILCQG RGSAANSAVC YCLGITEVDP TQTPLLFERF ISEERGEAPD
IDVDFEHERR EEVIQYIYGK YGTHRTALAA ALATYRVRGA VREVGKALGL DGQRIDRLAK
SHQWFDGHEA LPARLVEAGF DPDAPVTRQW LALSAALIGF PRHLSQHVGG FVIARDALSR
LVPIENAAMK DRRVIQWDKD DLESLGLLKV DVLALGMLSA LKRALALITD WRGPPPGANG
GAPISPSWRM QDIPRDDIAT YEMIQEADTV GVFQIESRAQ QSMLPRLKPS EFYDLVVQVA
IVRPGPISGG MVHPYLKQRD LQRRGLRPPP AYPALEQALE RTLGVPIFQE QVMQICMIAA
DFSGGDADEL RRAMAAWKRK GGLQQFHQRI VGRMVEKNYD REFAERIFQQ IKGFGEYGFP
ESHAYSFALL AYLSAWLKCH EPAIFLAALL NSQPMGFYAP SQLVQDARRH AVEVRPVDVG
HSGWDCTLEP ASPGSTPCAA RSLQPAVRLG LRLVSGFSEA AADRIVAARA VSTFASLDDL
ARRAGLDPQA LQVLARADAL QSLAGHRRQQ AWHASGQPRR TALLAGATHR EDPLVLPAPP
EAEEITLDYA STQLTLRRHP LALLRPRLVQ RGWRNARELG ALKDGCRVWA CGIVVGRQQP
ETAKGTIFVT LEDETGSVNV IVWKGVRERF RQALLASRLL AVAGEWQRSP EGVTHLLARR
LVDMTPWLGR LATSSRDFH
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