Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpe_A1525 |
Symbol | |
ID | 4783543 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylibium petroleiphilum PM1 |
Kingdom | Bacteria |
Replicon accession | NC_008825 |
Strand | + |
Start bp | 1644056 |
End bp | 1646197 |
Gene Length | 2142 bp |
Protein Length | 713 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640090092 |
Product | putative membrane transport protein |
Protein accession | YP_001020722 |
Protein GI | 124266718 |
COG category | [R] General function prediction only |
COG ID | [COG4147] Predicted symporter |
TIGRFAM ID | [TIGR00813] transporter, SSS family [TIGR03648] probable sodium:solute symporter, VC_2705 subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.11543 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGGAA TCACACCGAA TGCGGCCGCC GCGGGCAGCA GTCGCGCCGC CAACGCGGCC TTCAAGTCGC AACTTAACAA GGTCTACACC TGGTACACCG GTGGCTTCAT CGCCTTCGTG ATCGTGCTGG CGGTGCTGGA GCAGATGGGG CTGCCGCGCA GCTACATCGG CTTCATCTTC CTGCTGGCTA CCGTGGCCCT GTATGCCGGC ATCGGCATCA TGAGCCGCAC CACCGATGCG GCCGAGTACT ACGTGGCGGG GCGCCGCGTG CCGGCGGTCT ATAACGGCAT GGCCACCGGT GCCGACTGGA TGTCGGCCGC CTCGTTCATC GGGATGGCCG GCACGCTGTA CCTCACCGGC TACGGCGGCC TGGCCTTCAT CATGGGCTGG ACCGGCGGCT ACTGCCTGGT GGCGCTGTTC CTGGCGCCCT ACCTGCGCAA GTTCGGGCAG TTCACCATTC CCGACTTCCT GGGTGAACGT TACGGCGGCA ATCTGGCCCG GTTCATCGGC ATCTTCGCGG CGATCCTGTG CTCGTTCACC TACGTGGTGG CGCAGATCTA CGGCGTAGGG TTGATCACGG CACGCCTGAG CGGGCTGGCG TTCGAGATCG GGGTGTTCGT CGGCCTCGGT GGCATCCTGG TGTGCTCCTT CCTCGGCGGC ATGCGCGCGG TCACCTGGAC GCAGGTGGCG CAGTACATCA TCCTGATCAT CGCGTACATG ATCCCTGTGG TTTGGCTGTC GGTGAAGCAG ACGAGCGTGC CGGTGCCGCA GGCCATCTAC GGCGCCCAAC TGCAGAAGAT CACCGCCAAG GAAGCTCAGC TCAAGGCCGA CCCGAAGGAA CTGGAGGTCA TCGCCGCCTT CAAGCAGCGT GCCGAGGGCG CCGATGCCAA GTTGAAGGAC GTGCCGGCCG CGATGGCAGC CGACAAGGCA GCGGCCGAGC AGAAGCTCGC CGACCTGAAG GGCGCGAATG CACCGCTGGC CGATGTGCAG GCGGCCGAGA AGGCGCTGGC TGCCTTGCCG GCAACGGAAG CCGATGCCAA GAAGGCCTAC ACGGCGGCGA AGACTGCGAA CGAGGCGCGT GCCAAGCCCT TGGCCGGCAT GCCACCCCAC GCACAGCAGT ACGCCGGCGA CCCGAATGGC GACGAGAAGG CGCAGAAGAC CTTCGACGAT TCGCGTCGCA ACTTCCTGGC GCTGGTGTTT TGCCTGATGG TCGGCACGGC CGCGCTGCCG CACATCCTGA TGCGCTATTA CACGACGCCT TCGGTCAAGG AGGCGCGCGA ATCGGTGACG TGGTCGCTGT TCTTCATCTT CCTGCTTTAC TTCACCGCGC CGGCGTTGGC CGTGCTGGTG AAGTTCGAGG TGTTCAACAA CGTCGTCGGC ACGCCGTTCG ACCAGTTGCC CGCCTGGATC GCCAACTGGG CGCGGGTCGA TCCGACGCTG ATGTCGGTCA CCGACATCAA CAAGGACGGC ATCCTGCAGC TCGGCGAGAT GAAGATCGGC GGCGACATCA TCGTGCTGGC CACGCCTGAG ATCGGTGGCC TGCCGTACGT GGTGTCGGGC ATGGTCGCCG CAGGCGGTCT GGCAGCGGCG CTGTCGACCG CGGACGGCCT GCTGCTCACG ATCGCCAACG CGCTGTCGCA CGACCTGTAC TACAAGATGA TCGATCCGAA CGCGTCGACC TCCCGCCGCG TGACGATCTC CAAGATCCTC TTGCTGGTCG TGGCCCTGGC AGCGGCCTAC GTGGCGTCGC AGAAGCCGGC GGACATCCTG TTCCTGGTGT CGGCGGCGTT CTCGTTCGCG GCGGCGGGCT TCTTCCCGGC CCTGGTGCTC GGCATCTTCT GGAAGCGTGC TTCCAGCGCC GGGGCCGTGC TGGGCATGAT CGCCGGCCTG GGGACGACCA TGTACTACAT GGTCCACAAC CAGCCCTGGC TGCGTGGCGT GTTCGGCATC ACCGATCCCG TCAGCCTGTG GTTCGGCATC CAGCCGATCT CGGCGGCGAC CTTCGGTGTG CCGATCGGTT TTGCGGTGAT CATCATCGTG AGCCTGTTCA CTCCGGCACC GAACAAGAAG GTGCAAGAGC TGATCGAGCA CGTTCGCTAT CCGAACCTGC GCGGCGACAC GGTGAAGAGC CTGGGTACCT GA
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Protein sequence | MAGITPNAAA AGSSRAANAA FKSQLNKVYT WYTGGFIAFV IVLAVLEQMG LPRSYIGFIF LLATVALYAG IGIMSRTTDA AEYYVAGRRV PAVYNGMATG ADWMSAASFI GMAGTLYLTG YGGLAFIMGW TGGYCLVALF LAPYLRKFGQ FTIPDFLGER YGGNLARFIG IFAAILCSFT YVVAQIYGVG LITARLSGLA FEIGVFVGLG GILVCSFLGG MRAVTWTQVA QYIILIIAYM IPVVWLSVKQ TSVPVPQAIY GAQLQKITAK EAQLKADPKE LEVIAAFKQR AEGADAKLKD VPAAMAADKA AAEQKLADLK GANAPLADVQ AAEKALAALP ATEADAKKAY TAAKTANEAR AKPLAGMPPH AQQYAGDPNG DEKAQKTFDD SRRNFLALVF CLMVGTAALP HILMRYYTTP SVKEARESVT WSLFFIFLLY FTAPALAVLV KFEVFNNVVG TPFDQLPAWI ANWARVDPTL MSVTDINKDG ILQLGEMKIG GDIIVLATPE IGGLPYVVSG MVAAGGLAAA LSTADGLLLT IANALSHDLY YKMIDPNAST SRRVTISKIL LLVVALAAAY VASQKPADIL FLVSAAFSFA AAGFFPALVL GIFWKRASSA GAVLGMIAGL GTTMYYMVHN QPWLRGVFGI TDPVSLWFGI QPISAATFGV PIGFAVIIIV SLFTPAPNKK VQELIEHVRY PNLRGDTVKS LGT
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