Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpe_A1517 |
Symbol | |
ID | 4783535 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylibium petroleiphilum PM1 |
Kingdom | Bacteria |
Replicon accession | NC_008825 |
Strand | - |
Start bp | 1633994 |
End bp | 1636471 |
Gene Length | 2478 bp |
Protein Length | 825 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 640090084 |
Product | helicase |
Protein accession | YP_001020714 |
Protein GI | 124266710 |
COG category | [R] General function prediction only |
COG ID | [COG1201] Lhr-like helicases |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.114808 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACCGGC GCGCGTCGCC GCCAGCCGCA CTCGACGGCT GGTTCGCCGC TCGCGGCTGG CAGCCGTTCG CGTTCCAGCG CAGGGTCTGG GCGGCGGCCG CGCGCGGCCA CAGCGGCCTG CTGCACGCCA CCACCGGCGC CGGCAAGACC TACGCGGTCT GGTTCGCCGC CCTGGGCCGC GCGCTGCAGC AGCGGGCCGC CGGCACCGAC GACAGCCGCG GCCTGCGGGT GCTGTGGCTC ACACCGATGC GCGCTCTCGC CGCCGACACG CAGCGTGCGC TCGAGGCGCC GCTCTCCGAG CTGATGCCCG GCTGGCGCGT GGGCCTGCGC ACCGGTGACA CGCCGAGCTC CGAGCGCGCG CGCCAGGCGA AGTCGCCGCC CGCCGCGCTG GTCACGACGC CCGAGAGCCT GTCGCTGATG TTGAGCCAGG CCGACGCGGC GCGGCGCCTG CAGCACGTCG ACATGGTGAT CGTCGACGAA TGGCACGAGC TGATGGGCAA CAAGCGCGGC GTGCAGACTC AGCTCGCGCT GGCGCGGCTG CGGCACTGGC AGCCGCGCCT CGTCGTGTGG GGCCTGTCTG CGACGCTGGG CAACCTGCCG CGCGCGCGGC AGGTGCTGCT CGGCGACGCC GACGCCCAGG GCGTGCTGGT GCAGGGCCGC CTGCCCAAGC GCGTGGTGGT CGACACCCTG GTGCCGCCGA ACCCGTCGCG CTTCCCCTGG GGCGGCCACC TCGGCATCGA GATGCTGCAG CCGGTGATCG ACGAGATCGA CCGTCACTCG ACCACGCTGG TCTTCACCAA CACCCGCTCG CAGGCCGAGA TCTGGTACCA GAAGCTGCTC GATGCGCGCC CCGACTGGGC CGGCGTGCTC GCGCTGCACC ACGGCTCGCT CGATCCCGCA CTGCGCGGCT GGGTCGAAGA GGGTCTGAAG TCGGGCCGGC TGAAGGCGGT GGTCAGCACC TCCAGCCTGG ACCTGGGCGT CGACTTCCTG CCGGTCGAGC GCGTGCTGCA GATCGGCAGC CCGAAGGGCG TGGCGCGGCT GCTGCAGCGT GCCGGCCGCA GCGGCCATGC GCCCGGCCGG GTCTCACGGC TCACGCTGGT GCCGACGCAC AGCCTCGAGC TGCTCGAGGC GGCCGCGGCG ATCCGCGCGG TCGCCGCGCG CCGCATCGAG TCGCGCCGCG CCCCGGACAA GCCGCTCGAC GTGCTGGTGC AGCACCTCGT CACCGTCGCG CTCGGCGGCG GGTTTCGCGC GTCGGACCTG CTGGCGGAAG TGCGCCGCAC CGACGCCTAC CGCACGCTGA CGGATGTCGA GTGGCAGTGG GCGCTCGACT TCGTCGCGCG CGGCGGACAG AGCCTGGTCG TCTACCCCGA GTACCGCCGC GTGCTGCCCG ACGACGACGG CATGTACCGC GTGCCCGATG CGGCGATCGG CCGCCGACAC CGCATGGGCA TCGGCACCAT CGTCTCCGAC GCCGCGATGC AGGTGCGCTT CGTGAACGGT ACGCGGCTCG GCAGCATCGA GGAGTCGTTC ATCGCGCGGT TGCGCCGCGG TGACCACTTC CTGTTCGGGG GGCGCCGGCT GGAGTTCGTG CGCAGCCATG AGATGACCGC CTTCGTGCGG CCCGCGACCG GCCGGCGCGG CGCGGTGCCG CGCTGGCAAG GCGGGCAGAT GCCCCTGTCG TCCGAGCTGG CGCACGCGGC ACTGGAGCGG CTGCAGCAGG CTGCGCGTGA CCGTTTCCCC GGTCCCGAGA TGCGGGCGCT GCGCCCTCTG CTCGAACTGC AGGCGCGCTG GTCGGCGCTG CCGGCGGCCG ACGTGCTGGT GGCCGAGACT ATGCGCAGCC GCGAGGGCCA GCACCTGTTC CTCTATCCCT TCGCCGGGCG CCTCGTGCAC GTCGGCCTCG CCGCGCTGCT GGCCTACCGT GTCGGCGCAC GGCAACCGGC GAGCTTCTCG ATCGCCGTCA ACGATTACGG CTTCGAGCTG CTGAGCGCCA CCCCCGTGGA CTGGTCCGCG CTGCTCGCGA CGCCAGAGGC CGCGCAGCGC CTGCTGACGA CCGACGCATT GCTGGAGGAC GTGCTGGCCG GCCTGAACGC CACCGAGCTG TCGCGCCGAA GATTCCGAGA GATCGCCCGC GTTGCAGGGC TGGTGTTCCA GGGCTACCCG GGCCAGGCGC GCAGCGCACG GCAGCTGCAG GCTTCGTCGA GCCTGTTCTT CGACGTGTTC CAGCGCCATG ACGCCGGCAA CCTGCTGCTG GGCCAGGCCG AGCGCGAAGT GCTGGAACAG GAGCTGGAGC TCGGCCGGCT GCGTGAGACG CTCACCGCGC TGACCCAGCG ACGCCTCGCC TTCTTCGAAC TGCGCCGCGC AACGCCGTTC GGCTTCCCGC TGATGGTCGA GCGGCTGCGC GAGGCACTCA GCACCGAGGC GCTGACGGAC CGCGTCGCGC GGCTGCTGCG CGAGCTCGAG CGAGCCGCCG CTCCGTGA
|
Protein sequence | MNRRASPPAA LDGWFAARGW QPFAFQRRVW AAAARGHSGL LHATTGAGKT YAVWFAALGR ALQQRAAGTD DSRGLRVLWL TPMRALAADT QRALEAPLSE LMPGWRVGLR TGDTPSSERA RQAKSPPAAL VTTPESLSLM LSQADAARRL QHVDMVIVDE WHELMGNKRG VQTQLALARL RHWQPRLVVW GLSATLGNLP RARQVLLGDA DAQGVLVQGR LPKRVVVDTL VPPNPSRFPW GGHLGIEMLQ PVIDEIDRHS TTLVFTNTRS QAEIWYQKLL DARPDWAGVL ALHHGSLDPA LRGWVEEGLK SGRLKAVVST SSLDLGVDFL PVERVLQIGS PKGVARLLQR AGRSGHAPGR VSRLTLVPTH SLELLEAAAA IRAVAARRIE SRRAPDKPLD VLVQHLVTVA LGGGFRASDL LAEVRRTDAY RTLTDVEWQW ALDFVARGGQ SLVVYPEYRR VLPDDDGMYR VPDAAIGRRH RMGIGTIVSD AAMQVRFVNG TRLGSIEESF IARLRRGDHF LFGGRRLEFV RSHEMTAFVR PATGRRGAVP RWQGGQMPLS SELAHAALER LQQAARDRFP GPEMRALRPL LELQARWSAL PAADVLVAET MRSREGQHLF LYPFAGRLVH VGLAALLAYR VGARQPASFS IAVNDYGFEL LSATPVDWSA LLATPEAAQR LLTTDALLED VLAGLNATEL SRRRFREIAR VAGLVFQGYP GQARSARQLQ ASSSLFFDVF QRHDAGNLLL GQAEREVLEQ ELELGRLRET LTALTQRRLA FFELRRATPF GFPLMVERLR EALSTEALTD RVARLLRELE RAAAP
|
| |