Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpe_A1490 |
Symbol | |
ID | 4784088 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylibium petroleiphilum PM1 |
Kingdom | Bacteria |
Replicon accession | NC_008825 |
Strand | + |
Start bp | 1606354 |
End bp | 1607040 |
Gene Length | 687 bp |
Protein Length | 228 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640090057 |
Product | putative outer membrane signal peptide protein |
Protein accession | YP_001020687 |
Protein GI | 124266683 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3047] Outer membrane protein W |
TIGRFAM ID | [TIGR03304] outer membrane insertion C-terminal signal |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.709079 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCCTCTG CAACGGTGGA TAACAAGGAG ACCAAGACCG TGAAGACGAT CCAGAAGATG GGGCGCATTG CCCTGGCTGC AACCTGCCTG CTGTCGGGCG CCGCGCTGCA TGCCGAAGAA GGCCCCTGGA TGATCCGCGC TCGCGCGCTG CTCATCGATC CGGACAACAA GTCCGACGCG ATTCCGTCGC TGGCGGTTCC TTCCAACGCG GTCGAGGTCG ACAGCCGCTG GGTGCCCGAA CTCGACATCA GCTACTTCTT CAACAAGAAC ATCGCAGCCG AACTGGTGCT GGCCTACACC AAGCTGGACG TGAAGGTGAA CGACAGCGCC ATCGGCGCCT TCAATGCCGG CTCGTTCTAC GCGTTGCCGC CATCGCTGCT GCTGCAATGG CACTTCCTGC CGGACGGGGG CATCCGTCCC TACGTCGGCG CAGGGATCAA CTACACGCAC ATCTCTCGCG TGAAGCTCTC GGTGCCGGGC GTGTTGCCGC TCTACCTCGA CAGCAGCAGC GTCGGTCCCG CGCTGCAGGC CGGCGTCGAC TTCAAGCTCG ACGGTCCGTG GTCGCTGAAC TTCGACATCA AGAAGGCCTG GATCGAATCG GACGTCCGCA CGGGCGCCGG TGTGCGCGTG AGCAAGGTCA AGCTCGATCC CATGCTGATC GGCATCGGCG TCGGCTACCG CTTCTGA
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Protein sequence | MASATVDNKE TKTVKTIQKM GRIALAATCL LSGAALHAEE GPWMIRARAL LIDPDNKSDA IPSLAVPSNA VEVDSRWVPE LDISYFFNKN IAAELVLAYT KLDVKVNDSA IGAFNAGSFY ALPPSLLLQW HFLPDGGIRP YVGAGINYTH ISRVKLSVPG VLPLYLDSSS VGPALQAGVD FKLDGPWSLN FDIKKAWIES DVRTGAGVRV SKVKLDPMLI GIGVGYRF
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