| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A1478 |
|---|
| Symbol | rbcL |
|---|
| ID | 4784076 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylibium petroleiphilum PM1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008825 |
|---|
| Strand | + |
|---|
| Start bp | 1594326 |
|---|
| End bp | 1595792 |
|---|
| Gene Length | 1467 bp |
|---|
| Protein Length | 488 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640090045 |
|---|
| Product | ribulose bisophosphate carboxylase |
|---|
| Protein accession | YP_001020675 |
|---|
| Protein GI | 124266671 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1850] Ribulose 1,5-bisphosphate carboxylase, large subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.263508 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.452968 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGAACAAGC CGATGGAAGA CGCAGCGATC ACCGACGTCA AGAAGCGCTA CAGCGCGGGC
GTCCTGAAGT ACCGGCAGAT GGGCTACTGG ATGCCCGACT ACGTGCCGAA GGACACCGAC
ACGATCTGCC TCTTCCGCAT CACGCCGCAG GACGGCGTGG ACCCGGTGGA GGCCGCGGCT
GCGGTGGCCG GCGAGTCCAG CACCGCGACC TGGACCGTCG TGTGGACCGA CCGCCTGACG
GCCTGCGACA GCTACCGCGC CAAGGCCTAC AAGGTGGAGC CGGTGCCGGG CATTCCGGGG
CAGTTCTTCG CCTGGGTGGC CTACGACATC ATCCTGTTCG AGGAAGGCTC GATCGCCAAC
ATGACGGCGA GCCTGATCGG CAACGTGTTC TCGTTCAAGC CGCTGAAGGC GGCGCGGCTC
GAGGACATCC GCATCCCGGT CGCCTACGTG AAGACCTTCA AGGGCCCGCC GACCGGTCTG
GTGGTGGAGC GCGAGCGGCT GGACAAGTTC GGCCGCCCGC TGCTGGGCGC CACGACCAAG
CCCAAGCTGG GCCTGTCGGG TCGCAACTAC GGCCGCGTGG TCTACGAGGG CCTGAAGGGC
GGCCTCGATT TCATGAAGGA CGACGAGAAC ATCAACTCGC AGCCTTTCAT GCACTGGCGC
GACCGCTACC TCTACGTGAT GGACGCGGTG AACAAGGCCA GCGCGGCCAC CGGCGAGATC
AAGGGCAGCT ACCTGAACGT GACGGCCGCG ACCATGGAGG ACATGTACGA GCGCGCCGAG
TTCGCCAAGG AACTGGGCAG CGTGATCGTG ATGATCGACC TGGTGATCGG CTACACGGCG
ATCCAGAGCA TGAGCAACTG GGCGCGCCGG AACGACGTGA TCCTGCACCT GCACCGCGCC
GGCCACGGCA CCTACACGCG CCAGAAGAAC CACGGCGTGA GCTTCCGCGT GATCGCCAAG
TGGATGCGGC TGGCCGGCGT GGACCACATC CACACCGGCA CCGCAGTCGG CAAGCTCGAG
GGCGACCCGA TGACGGTGCA GGGCTACTAC AACGTGTGCC GCGACAGCGT CACGAAGCAG
GACCTGCCGC GCGGACTGTT CTTCGACCAG GACTGGGCCG ACCTGAAGAA GGTGATGCCG
GTGGCGAGCG GCGGCATCCA CGCCGGCCAG ATGCACCAGC TGATCGACCT GTTCGGCGAC
GACGTGGTGC TGCAGTTCGG CGGCGGCACG ATCGGCCACC CGCAGGGCAT CCAGGCCGGG
GCGGTGGCCA ACCGCGTGGC ACTGGAATGC ATGGTGAAGG CGCGCAACGA AGGCCGCGAC
ATCAAGAACG AGGGCCCGGA GATCCTGCGC AAGGCCGCGC AGTTCTGCGC GCCGCTGAAG
CAGGCGCTCG ACACCTGGGG CGAGATCAGC TTCAACTACA CCCCGACCGA CACCAGCGAC
TACGCCGTCA CGCCGGGCGT GGCCTGA
|
|---|
| Protein sequence | MNKPMEDAAI TDVKKRYSAG VLKYRQMGYW MPDYVPKDTD TICLFRITPQ DGVDPVEAAA
AVAGESSTAT WTVVWTDRLT ACDSYRAKAY KVEPVPGIPG QFFAWVAYDI ILFEEGSIAN
MTASLIGNVF SFKPLKAARL EDIRIPVAYV KTFKGPPTGL VVERERLDKF GRPLLGATTK
PKLGLSGRNY GRVVYEGLKG GLDFMKDDEN INSQPFMHWR DRYLYVMDAV NKASAATGEI
KGSYLNVTAA TMEDMYERAE FAKELGSVIV MIDLVIGYTA IQSMSNWARR NDVILHLHRA
GHGTYTRQKN HGVSFRVIAK WMRLAGVDHI HTGTAVGKLE GDPMTVQGYY NVCRDSVTKQ
DLPRGLFFDQ DWADLKKVMP VASGGIHAGQ MHQLIDLFGD DVVLQFGGGT IGHPQGIQAG
AVANRVALEC MVKARNEGRD IKNEGPEILR KAAQFCAPLK QALDTWGEIS FNYTPTDTSD
YAVTPGVA
|
|---|
| |