| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A1456 |
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| Symbol | |
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| ID | 4784054 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008825 |
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| Strand | + |
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| Start bp | 1573432 |
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| End bp | 1574139 |
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| Gene Length | 708 bp |
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| Protein Length | 235 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640090023 |
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| Product | 3-oxoacid CoA-transferase |
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| Protein accession | YP_001020653 |
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| Protein GI | 124266649 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1788] Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit |
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| TIGRFAM ID | [TIGR02429] 3-oxoacid CoA-transferase, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0699745 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.879206 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAAGG TCTACCCGAG CGCGAAGGCC GCGCTCGACG GCATCGTGAA GGACGGCCAG
CTGCTGGCCG TCGGCGGCTT CGGCCTGTGC GGCATCCCCG AGGCCCTGAT CGACGCGCTG
CGCGACAGCG GCGTCAAGGA CCTGACGGTG ATCTCCAACA ACGCGGGCGT CGACGGCTTC
GGCCTCGGCA AGCTGCTCGA CACGCGGCAG ATCAGGAAGA TGATCTCCAG CTACGTGGGC
GAGAACAAGG AGTTCGAGCG CCAGTTCCTG GCCGGCGAGC TGGAGCTGGA GTTCACGCCC
CAGGGCACGC TGGCCGAGAA GCTGCGCGCC GGCGGCGCCG GCATCCCGGC CTTCTTCACC
AAGACCGGCG TCGGCACCAT GGTGGCCGAG GGCAAGGAAA CGCGCGAGTT CGACGGCGCC
GTCTACGTGA TGGAGCGTTC GCTGCTGCCC GAGGTGTCGC TGGTCAAGGC CTGGAAGGCC
GACAAGAGCG GCAACCTGCT GTTCCGCCGC ACCGCGCGCA ACTTCAACCC GGCGGTGGCG
ATGGCCGGGA AGCTCACGGT GGTCGAGGTC GAGGAGATCG TCGAGACCGG CCACTTCGAT
CCCGACGCGG TGCACCTGCC CGGCATCTAC GTGCACCGCA TCGTGCTCAA TGCCACGCCG
GAAAAACGCA TCGAGAAGCG CACCATCACC GAGAAGGCGG GAGTCTGA
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| Protein sequence | MNKVYPSAKA ALDGIVKDGQ LLAVGGFGLC GIPEALIDAL RDSGVKDLTV ISNNAGVDGF
GLGKLLDTRQ IRKMISSYVG ENKEFERQFL AGELELEFTP QGTLAEKLRA GGAGIPAFFT
KTGVGTMVAE GKETREFDGA VYVMERSLLP EVSLVKAWKA DKSGNLLFRR TARNFNPAVA
MAGKLTVVEV EEIVETGHFD PDAVHLPGIY VHRIVLNATP EKRIEKRTIT EKAGV
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