Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpe_A1434 |
Symbol | |
ID | 4783716 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylibium petroleiphilum PM1 |
Kingdom | Bacteria |
Replicon accession | NC_008825 |
Strand | + |
Start bp | 1545456 |
End bp | 1547606 |
Gene Length | 2151 bp |
Protein Length | 716 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640090000 |
Product | diguanylate cyclase/phosphodiesterase |
Protein accession | YP_001020631 |
Protein GI | 124266627 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.486546 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGTACGACC CCCGCGTGGT CGTGCTGTCC ATCGCTGTCG CGATCCTGGC TTCGTTCGTC ACGCTCGAAC TGGCCAAGCG CGTGCGCAGT GCCGACCGCG TGCTGTCGAT GTGCTGGTGC ATCGGCGGCG CCCTGGTCAT GGGCAGCGGC ATCTGGTCGA TGCACTTCGT CGGCATGCAC GCCTTCAGCC TGACGATCCC GCTCGGCTAC CGCGTTTCGA CCACGCTGCT GTCGTGGGGC GTGGCGCTGC TGGTCTCGCT GGTGGCGCTG GGGATCGCCG GGCGGGAGCA GCTGTCACGC AGCCTGCACG TGTGGGGGGC GCTGGCGATG GGCGGCGGCA TCATGGCGAT GCACTACATC GGCATGGCCG CACTGGAGAT GGCGCCGGGC ATCCAGTGGG ATGCGCGCTG GGTGGCGGCA TCCGGGTTGA TTGCGGTGAC CGCATCCGCT GCCGCTCTGC GGATCTTCTT CTGGATGCGC CGCCATGCCG GCTGGTCGGC GCTGGCCTAC CAGTGCGCTG CAGCGGTGGT CATGGGACTC GCGATCAGCG GCGTGCACTA CAGCGGCATG GCAGCTGCAG GCTTCCCCGA GGGCAGCGCC TGCCTGAGTC TGGACGGCAT CAACGGCGAC TCGCTGGTGC TGATCGTCAG CGTGGCCACC GTGCTGATGC TGACGATCAC GCTGGTGACC TCGGTCTTCG ACCGGCGCAT GCAGGCCACC GCGGACGGCC TGTCGCAGTC GTTGCAGCAA GCCAACGAAC GCCTCCAGTC GGCCAACGAC GAACTGAGCC GCCTGGCCTA CCAGGACGCG TTGACGGGCT TGCCCAACCG CAGCTACTTC GAGTCGCGCC TGAGCCAGGC GGTCGCCCGT ATCGAACGGC TGCGCGAGCT GCCGACGCCC TCGGCATCGG CGGGCCTGGC GGTGCTGTTC ATCGACCTCG ACGGCTTCAA GCCGATCAAC GATTCCTACG GTCATGCCCA TGGCGATCTG GTGCTGCAGG CTGTGGCCGT GCGCCTGCGC GAGGCGGTGC GCGCGGCCGA CACGCTGGCC CGCCTGGGCG GCGACGAATT CATCGTGCTG GTCGAGGACG TGAGCTGCGC GGGGGATTGC ATCCACGTCG CGAAGCGCGC CCTGGCCAGC ATGGGCGAGC CGCTCGTCGT GGTCGGCCAG CCGGTCCACC TGTCGTGCTC GATCGGGGTG GCGATGTACC CCGACGCCGG CGACGCCAGG CGCCTCATCG CGCACGCCGA TGCGGCGATG TACGAGGCGA AGCGGGGTGG CGGCAGCACC TACGCGGTCT ACGAGTCGGC GATGAACCAG GGCGCCGACC AGCAGGTGGC GCTGTACAAC GATCTCGTCA CGGCGATGGA GCGTGGCGAA CTGCAACTGC ACTACCAACC CAAGGTCGAT CTACGTACCG ACACGATCCG CGGCGTCGAG GCGTTGATGC GCTGGCGCCA TCCCCAGCGG GGCATGGTGA GCCCGGTGGC CTTCATCCCG GTGGCCGAGC GCTTCGGCCT GATCAACACG CTCGGCGCCT GGGTCATCGA CGAAGCCTGC CGGCAGCTGA GCGCCTGGGC CGACGAAGGC CTGCACATGC GCGTGGCGAT CAACCTGTCG GCGCACCAGC TCATGCAGGC TGACCTGACA GAGCGGGTGG CCGACGCACT GGCGCTGCAC CAGGTCGAGG CTTCGCAGCT GATCTGCGAG ATCACCGAGT CGGTCGCGAT GGAGGACACC CGCGTCACCC AGCGCGCGAT CGACGGCCTG CTGGCCATCG GCGTGCAACT GGCGATCGAC GACTTCGGAA CCGGCTACTC CAGCCTCAGC TACCTGCGCC AGCTGCGGGC CCGGCAGCTG AAGATCGACC GCAGCTTCAT CCGCGACCTG GCCGGCAGCA GCGACGCCCG CGCGGTGGTC GATGCGGTGA TCCGGCTGGC CCATGCGCTG GGCATGCAGG TGGTGGCCGA GGGCGTGGAG GAGACCGACC AGCGCGACCT GCTGGTCGAG ATGGGTTGCG ACCAGCTGCA GGGCTTCCTG TACGCCAAGC CGATGGCGGC CGACGACATC TCGTACTGGG CGCGCCACCG CGGCGAGCAG CACGCGGTGC CGTTCTCCGA CTCGACCCTG GTCGACACGA TTCCGGGTTG A
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Protein sequence | MYDPRVVVLS IAVAILASFV TLELAKRVRS ADRVLSMCWC IGGALVMGSG IWSMHFVGMH AFSLTIPLGY RVSTTLLSWG VALLVSLVAL GIAGREQLSR SLHVWGALAM GGGIMAMHYI GMAALEMAPG IQWDARWVAA SGLIAVTASA AALRIFFWMR RHAGWSALAY QCAAAVVMGL AISGVHYSGM AAAGFPEGSA CLSLDGINGD SLVLIVSVAT VLMLTITLVT SVFDRRMQAT ADGLSQSLQQ ANERLQSAND ELSRLAYQDA LTGLPNRSYF ESRLSQAVAR IERLRELPTP SASAGLAVLF IDLDGFKPIN DSYGHAHGDL VLQAVAVRLR EAVRAADTLA RLGGDEFIVL VEDVSCAGDC IHVAKRALAS MGEPLVVVGQ PVHLSCSIGV AMYPDAGDAR RLIAHADAAM YEAKRGGGST YAVYESAMNQ GADQQVALYN DLVTAMERGE LQLHYQPKVD LRTDTIRGVE ALMRWRHPQR GMVSPVAFIP VAERFGLINT LGAWVIDEAC RQLSAWADEG LHMRVAINLS AHQLMQADLT ERVADALALH QVEASQLICE ITESVAMEDT RVTQRAIDGL LAIGVQLAID DFGTGYSSLS YLRQLRARQL KIDRSFIRDL AGSSDARAVV DAVIRLAHAL GMQVVAEGVE ETDQRDLLVE MGCDQLQGFL YAKPMAADDI SYWARHRGEQ HAVPFSDSTL VDTIPG
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