| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A1431 |
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| Symbol | |
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| ID | 4783713 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008825 |
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| Strand | - |
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| Start bp | 1540264 |
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| End bp | 1543275 |
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| Gene Length | 3012 bp |
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| Protein Length | 1003 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640089997 |
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| Product | glycine dehydrogenase |
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| Protein accession | YP_001020628 |
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| Protein GI | 124266624 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0403] Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain
[COG1003] Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain |
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| TIGRFAM ID | [TIGR00461] glycine dehydrogenase (decarboxylating) |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.961766 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCAGGC CCCTCGCCCT GCCCCTCGCC GCACTCGAAC ACACCACCGA CTTCGCCGGC
CGTCACATCG GCATCGACCC CGCCGACGAA CAGCACATGC TGTCGGTGAT CGGCGCGGCT
TCGCGCCAGG CCATGATCGA GGCCATCGTC CCGCGCAGCA TCGCCCGCGC GCGCCCGATG
GTGCTGCCCG AACCCGTCGG CGAGGTCCAG GCGCTGGCCG AGCTGAAGGC GATCGCCGCG
AAGAACCGCG TGTACCGCAG CTACATCGGG CAGGGCTACC ACGGAACGCA CACGCCGGGC
GTCATCCTGC GCAACATCCT CGAGAACCCG GCCTGGTACA CCGCCTACAC GCCCTACCAG
GCCGAGATCT CGCAGGGTCG GCTCGAGGCG CTGGTGAATT TCCAGACCAT GGTGTGCGAC
CTGACCGGCA TGGCGATCGC CAACGCCTCG ATGCTCGACG AGGCCACCGC CGCCGCCGAG
GCCATGACAT TGGCCCGACG CAGCGTGAAG AGCAAGAGCG CCACGGTCAT CGTGGCTTCG
GATTGCCACC CGCAGACCAT CGAGGTGATC CGCACGCGCG CGCGGCCGCT GGGCATCGAG
GTGCTGGTGG GCCTGGTGCC GGAGCTGATG GCGCAGCACG AGTACTTCGC CGTGATCGCA
CAGTACCCGG CGACCGGCGG CATCGTGCAC GACATGAAGC CCTATGTGGA TGCGGCGCAT
GCCAGCGGTG CGGCCTTCGT CGTCGCCGCC GACCTGCTGG CGCTGACGCT GCTCACGCCG
CCCGGTGAAT GGGGTGCCGA TATCGCCATC GGCAGCACCC AGCGCTTCGG CATGCCGATG
GGCGCCGGCG GCCCGCACGC GGCCTTCCTG GCCTGCCGTG ACGAGTTCAA GCGCTCGATG
CCGGGACGCC TGGCCGGCGT GAGCGTCGAC GCGCACGGCC GGCCCGCCTA CCGGCTGGCG
TTGCAGACGC GCGAGCAGCA CATCCGCCGC GAGAAGGCCA CGTCGAACAT CTGCACCGCC
CAGGTACTGC CGGCGGTGGT GGCGAGCATG TATGCGGTCT ACCACGGACC TCAGGGGCTC
AAGCGCATCG CGCAGCGCGT GGCGAGCTAC ACCGCCATCC TGGCGCACGG CCTGCGCGCG
ATGGGCTTCG AGCTCGCCGG TGACAGCGCC TTCGACACGC TGTGCGTCGA GACCGGCATC
GAAACCAATG CCATCGCCCG CCGCGCCCGC GATGCCGGAG CCAACCTGCG ACGCCTGTCG
GCCACGCAGC TCGGCATCAC GCTGGACGAG ACCACCACGC GCGAAGATCT CACCGCGCTG
TGGTCATGGT TCGCGCGCTC CGAGGGCATG GTGCCCAACG TCGCTGCGTT CGCGCACGGC
GCCGACCCGC TGATCCCCAG CGAGCTGCGC CGCACCAGCG CCTACCTGAC CCACCCGGTC
TTCAACAGCC ACCACAGCGA GACCGAGATG CTGCGCTACC TGCGCAGCCT GGCCGACAAG
GACCTCGCGC TCGACCGCAC GATGATCCCG CTGGGTTCGT GCACCATGAA GCTCAACGCG
ACCAGCGAGA TGATCCCGAT CACCTGGCCC GAGTTCGCGC ACATCCACCC GTTCGCCCCG
GCCGAGCAGC TGGCCGGCTA TGCCGAACTC GACGCCCAGC TGCGCCAGTG GCTGTGCGAG
GCCACCGGCT ACGCCGGCAT CAGCCTGCAG CCCAACGCCG GCTCGCAGGG CGAATATGCC
GGCCTGCTGG CGATCCAGGC CTGGCATGCC TCGCGCGGCG ACGCGCAGCG CGACGTCTGC
CTGATCCCCG AGTCGGCGCA CGGCACCAAC CCGGCGAGCG CCCAGATGGC CGGCATGCGC
GTGGTGGTGA CGAAGTGCGA CGCCGAGGGC AACGTCGACC TCGACGACCT GCGCGCCAAG
TGCGAGCAGC ACAGCTCGCA ACTGGCCGCC GTGATGGTCA CCTACCCGTC GACCTACGGC
GTGTTCGACC CGCACATCAA GGCGCTGTGC GCACTGGTCC ACCAGCACGG CGGCCGGGTC
TACGTGGACG GCGCGAACAT GAACGCGCTG GTCGGCGTGG CCGCGCCGGG CGAGTTCGGC
GGCGACGTGA GCCACCTCAA CCTTCACAAG ACCTTCTGCA TTCCGCACGG CGGCGGCGGC
CCGGGCGTGG GCCCGGTGTG CGTGGTCGAG GACCTGGTGC CCTTCCTGCC GACGCACCGC
ACGGGCGCCT CGGCGAGCTC CGTGGATGCC TACGTCGGCA GCGCGGTCGA GCCGACGCCG
GGCCGCCCCA AGGTGGCGAG CGCCCTCTCG GGGGGCAGCG AAGTGCCCGC AGGGCCGAGC
GTGGGGGCCG TCAGTGCTTC GCCGCTGGGC AACGCGGCGG TGCTGCCGAT CAGCTGGATG
TACGTCCGCA TGATGGGTGC AGCCGGCCTG ACCGCTGCGA CCGAGACCGC GATCCTGAGC
GCGAACTACA TCGCCGCGCG GCTGGCCGAC CACTACGACA TCCACTTCAG CGGCGAGGTC
GACGGGCTCA AGGGCGGCGG TGTCGCCCAC GAGTGCATCC TCGACCTGCG CCCGCTGAAG
GACAGCAGCG GCGTCAGCGC CGAGGACGTG GCCAAGCGCC TGATCGACTA CGGCTTCCAC
GCGCCGACGC TGAGCTTCCC GGTCGCCGGC ACGCTGATGG TCGAGCCGAC CGAGAGCGAG
TCGCTGCACG AGCTCGACCG CTTCTGCGAC GCACTGATCG CGATCCGCGC CGAGATCGCC
CGGGTCGAGC AAGGCCACTG GCCGCAGGAC GACAACCCGC TCAAGCACGC GCCGCACACC
GCCGAGGCGC TGCTGAAGGC CGACTGGCCG CACCCCTACT CGCGTGAGGA GGCCGCCTAC
CCGGTGAGCA GCCTGCGGCG TCAGAAGTAC TGGGCACCGG TCGGTCGCGT CGACAACGTG
CACGGCGACC GCAACCTGTT CTGCAGCTGC GTGCCGCTGA GCGCCTACGC CGAAGCCGAC
AAGCAGGCAT GA
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| Protein sequence | MLRPLALPLA ALEHTTDFAG RHIGIDPADE QHMLSVIGAA SRQAMIEAIV PRSIARARPM
VLPEPVGEVQ ALAELKAIAA KNRVYRSYIG QGYHGTHTPG VILRNILENP AWYTAYTPYQ
AEISQGRLEA LVNFQTMVCD LTGMAIANAS MLDEATAAAE AMTLARRSVK SKSATVIVAS
DCHPQTIEVI RTRARPLGIE VLVGLVPELM AQHEYFAVIA QYPATGGIVH DMKPYVDAAH
ASGAAFVVAA DLLALTLLTP PGEWGADIAI GSTQRFGMPM GAGGPHAAFL ACRDEFKRSM
PGRLAGVSVD AHGRPAYRLA LQTREQHIRR EKATSNICTA QVLPAVVASM YAVYHGPQGL
KRIAQRVASY TAILAHGLRA MGFELAGDSA FDTLCVETGI ETNAIARRAR DAGANLRRLS
ATQLGITLDE TTTREDLTAL WSWFARSEGM VPNVAAFAHG ADPLIPSELR RTSAYLTHPV
FNSHHSETEM LRYLRSLADK DLALDRTMIP LGSCTMKLNA TSEMIPITWP EFAHIHPFAP
AEQLAGYAEL DAQLRQWLCE ATGYAGISLQ PNAGSQGEYA GLLAIQAWHA SRGDAQRDVC
LIPESAHGTN PASAQMAGMR VVVTKCDAEG NVDLDDLRAK CEQHSSQLAA VMVTYPSTYG
VFDPHIKALC ALVHQHGGRV YVDGANMNAL VGVAAPGEFG GDVSHLNLHK TFCIPHGGGG
PGVGPVCVVE DLVPFLPTHR TGASASSVDA YVGSAVEPTP GRPKVASALS GGSEVPAGPS
VGAVSASPLG NAAVLPISWM YVRMMGAAGL TAATETAILS ANYIAARLAD HYDIHFSGEV
DGLKGGGVAH ECILDLRPLK DSSGVSAEDV AKRLIDYGFH APTLSFPVAG TLMVEPTESE
SLHELDRFCD ALIAIRAEIA RVEQGHWPQD DNPLKHAPHT AEALLKADWP HPYSREEAAY
PVSSLRRQKY WAPVGRVDNV HGDRNLFCSC VPLSAYAEAD KQA
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