| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A1377 |
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| Symbol | |
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| ID | 4783970 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008825 |
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| Strand | + |
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| Start bp | 1483873 |
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| End bp | 1486068 |
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| Gene Length | 2196 bp |
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| Protein Length | 731 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640089943 |
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| Product | Cache sensor hybrid histidine kinase |
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| Protein accession | YP_001020574 |
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| Protein GI | 124266570 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.873394 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGGCGCTC GTCTGGTCGA ATGGCGTCGT ACGTTCCGGC GGCAGGCTGC CGGGTCTTTG
CTGCTGCTGC TGGCCGTGGC CGTCTTCCTG GGCGTCTCGC TCGCGCAGAG CTTCGATCGC
TACCAGGTCG CGGCCGATGA TGACCTCGAG AACCTCACGC TCAACCTCGA GCGCTATCTC
TTCACCCGCT TGCAGGCGGC CGACCTCGTG CTGCAGTCGG CGGCGCAGAG CTTCGCGCTG
ATGAGCGCGG CCGGTCCGGT GAGCGAGACC GAGTTCAATG CCGCACTGTT CGAGTTGCAG
AAGCGGCTCC CCGATGCCCC GGCACTGCGC GCGGCCGACC ACACCGGGCT GGTGCTCTAT
GGCGGGGGTG TCGACCCTGC GCAGAGGCTC AGCGTAGAGC GGCGCCAGTT CTTCCAGGAA
GCCAAGAGTT CCTCGACGAT GGTGCTGGGG CTGCCGCTCA AGTCACGCAT CACCGGCCGC
TGGGTGCTGC CGCTGGCCCA GCAGCTGCGC GACCACCGCA ACGCCTTCGC CGGTGTCGTC
TACATCAACC TCGATCTCGA GGAACTGAAC GGATTCTTCG GCTCGTTGAA GCTTGGCGCC
CAAGGGGTGA TCACGCTGTT CAACGCGCGC CGGGAAGTCC TGCTGCGCCT GCCGGCCGCG
CCGATGGCGC AGGACGAGCA ACCGGTGCGC GTGGCGGCGC CGGAGGTTCT GAACTCGCTC
GCGTCAGGCA AGCCGGCGGA CCGGTTCCGC ACCCGAAGCT CGATCGACGG CGTGCTGCGG
GCCGTGATGT ACCGGCAGGT CGGCGGCTAT TCGGTCTTCA TCCTGGCCGG CCTGGCGGAG
GCGGACTTCC GGGCGCCCTG GTACCGGGAG CTGGCGATCA CGGTGGCGTT CTGGCTCGTT
CTGGCGGGTG CGCTCTGTCT GTTGTTGGTG CAGCAGTACC GGTCGGGGCG CGGCCAGCTG
CGGGCGCTGC GGCTGCTCCA GGAGGCCAAG GAGCAGGCGG TGCGGGCCAA TGACTCGAAG
TCGCTGTTCC TGGCCAACAT CAGCCATGAG ATCCGCACGC CCCTCAACGG CGTGCTGGGC
TTCGCGCAGA TCGGCTACCG CGATCCGTCG GTCGTTCCGG AGGCGCGCCA GAAGTTCGCG
CGCATCCTCG AGTCCGGCAA GCTGCTGCAG GGCATTCTGA ACGACGTGCT GGACATGTCC
AAGATCGAGG CGGGCAAGCT CCTGCTGGAC CCAACCCCCA CGATGCTGCG GCCGGCCCTG
GAGCGTGCGG TCGACCTGGT CCGGGGCTTC GCGCGCGACA AGGGCATCGC GCTGTGCCTC
ATGGTGGACC GTCGCGTGCC CGAGGTCATC GTCGTCGATC CCCTGCGGCT GGGGCAGATC
CTGCTCAACC TGCTGTCGAA TGCGGTCAAG TTCACCGCGT CCGGCCAGGT GGACGTGACG
GTCGGCGTCT CCGGCGACAA GCTGGTCATC AACGTGCGGG ACAGCGGGCT GGGCATGTCC
GAAGAGCAGA TCTCCCGGCT CTTCATGGCG TTCGAGCAGG CCGATCGATC GACCACGCGT
CGTTATGGAG GCACCGGCCT GGGCCTGGCG ATCACCAAGC GGCTGGTCGA GATGATGAAT
GGCTCGATCG TGGTCACGAG CCACCTGGGG GCCGGATCCA CGTTTTCGAT TCGCCTGCCG
CTCGCGCGCT CGACCTTGAC CTCGGTGGAG CCCGAAGGGC CGGTCGGCAC CGACGCGGAG
CCTGTCGGTG CCGACACGAT GCTGCAGCCT CAACGGGGCG AACGCGAAGA GACCGCGGGC
CGGCTGCCGC ATTCGAGGCT CGACGGGATG CGCGTGCTGG TGGCCGAGGA CAACCCGGTC
AATCAGATCG TCATCGAGAG CATGCTGTCG ATGGAAGGGG CCTCCGCGGA GGTGGTGGCT
GATGGCTACG AGGCGATCGA CCGCGTCGCC GCGCAGCTGG ATCCGAAGTA CAACGCGGTG
CTGCTGGACG TGATGATGCC TGGCATCGAC GGCTACGAGA CCGCGCGACG CATCCACTCG
CTGGACGCGG AGTTGCCCAT CATCGGCCAG ACCGGTCACG CGCTCGCGGA GGATCGCACC
CACTGCATCG AGGCTGGCAT GGTCGAGCGC GTCACCAAGC CGCTCGATGC GGATGAACTC
GTCAGCGTGC TGCTGAAGCA TTCGCGCCAG GTCTGA
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| Protein sequence | MGARLVEWRR TFRRQAAGSL LLLLAVAVFL GVSLAQSFDR YQVAADDDLE NLTLNLERYL
FTRLQAADLV LQSAAQSFAL MSAAGPVSET EFNAALFELQ KRLPDAPALR AADHTGLVLY
GGGVDPAQRL SVERRQFFQE AKSSSTMVLG LPLKSRITGR WVLPLAQQLR DHRNAFAGVV
YINLDLEELN GFFGSLKLGA QGVITLFNAR REVLLRLPAA PMAQDEQPVR VAAPEVLNSL
ASGKPADRFR TRSSIDGVLR AVMYRQVGGY SVFILAGLAE ADFRAPWYRE LAITVAFWLV
LAGALCLLLV QQYRSGRGQL RALRLLQEAK EQAVRANDSK SLFLANISHE IRTPLNGVLG
FAQIGYRDPS VVPEARQKFA RILESGKLLQ GILNDVLDMS KIEAGKLLLD PTPTMLRPAL
ERAVDLVRGF ARDKGIALCL MVDRRVPEVI VVDPLRLGQI LLNLLSNAVK FTASGQVDVT
VGVSGDKLVI NVRDSGLGMS EEQISRLFMA FEQADRSTTR RYGGTGLGLA ITKRLVEMMN
GSIVVTSHLG AGSTFSIRLP LARSTLTSVE PEGPVGTDAE PVGADTMLQP QRGEREETAG
RLPHSRLDGM RVLVAEDNPV NQIVIESMLS MEGASAEVVA DGYEAIDRVA AQLDPKYNAV
LLDVMMPGID GYETARRIHS LDAELPIIGQ TGHALAEDRT HCIEAGMVER VTKPLDADEL
VSVLLKHSRQ V
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