Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpe_A1342 |
Symbol | |
ID | 4785448 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylibium petroleiphilum PM1 |
Kingdom | Bacteria |
Replicon accession | NC_008825 |
Strand | + |
Start bp | 1447945 |
End bp | 1448415 |
Gene Length | 471 bp |
Protein Length | 156 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640089908 |
Product | rRNA large subunit methyltransferase |
Protein accession | YP_001020539 |
Protein GI | 124266535 |
COG category | [S] Function unknown |
COG ID | [COG1576] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR00246] rRNA large subunit m3Psi methyltransferase RlmH |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCTCG CGCTGGTCGC CGTCGGCCAG CGCCTGCCAG CCTGGGCCGA AACGGCCTGC GAGGATTACC TCAAGCGCTT TCCCGCCGAT TGGCGCGTGG AACTGAAGGC GGTGAAGGCG GAGCCACGCA CCCAGGGCAA GACCGTGGAC GCCATGAAGG CCGCCGAGGC GCAGCGCATC GAGGCGGCCT GCGCCAGGGG CGTGCGCCGT GTCGTGCTCG ACGAGCGCGG CACCCGCCTG ACCACCCAGC AGCTGGCGCA GAGGCTGCAG GCCTGGCAGC TCGACGGCCG CGACGTGGCG CTGCTGATCG GCGGCCCCGA TGGCCTGGCC GACACGCTCA AGGACGGCGC CGACGAGACG CTGCGTCTGT CGGACCTGAC GCTGCCTCAC GCCTTCGCAC GGGTCTTGCT CGCCGAAGCG CTGTACCGGG CGTGGTCGGT CAACGCCGGC CACCCCTATC ACCGCGAGTA G
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Protein sequence | MKLALVAVGQ RLPAWAETAC EDYLKRFPAD WRVELKAVKA EPRTQGKTVD AMKAAEAQRI EAACARGVRR VVLDERGTRL TTQQLAQRLQ AWQLDGRDVA LLIGGPDGLA DTLKDGADET LRLSDLTLPH AFARVLLAEA LYRAWSVNAG HPYHRE
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