Gene Mpe_A1342 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpe_A1342 
Symbol 
ID4785448 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylibium petroleiphilum PM1 
KingdomBacteria 
Replicon accessionNC_008825 
Strand
Start bp1447945 
End bp1448415 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content72% 
IMG OID640089908 
ProductrRNA large subunit methyltransferase 
Protein accessionYP_001020539 
Protein GI124266535 
COG category[S] Function unknown 
COG ID[COG1576] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00246] rRNA large subunit m3Psi methyltransferase RlmH 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCTCG CGCTGGTCGC CGTCGGCCAG CGCCTGCCAG CCTGGGCCGA AACGGCCTGC 
GAGGATTACC TCAAGCGCTT TCCCGCCGAT TGGCGCGTGG AACTGAAGGC GGTGAAGGCG
GAGCCACGCA CCCAGGGCAA GACCGTGGAC GCCATGAAGG CCGCCGAGGC GCAGCGCATC
GAGGCGGCCT GCGCCAGGGG CGTGCGCCGT GTCGTGCTCG ACGAGCGCGG CACCCGCCTG
ACCACCCAGC AGCTGGCGCA GAGGCTGCAG GCCTGGCAGC TCGACGGCCG CGACGTGGCG
CTGCTGATCG GCGGCCCCGA TGGCCTGGCC GACACGCTCA AGGACGGCGC CGACGAGACG
CTGCGTCTGT CGGACCTGAC GCTGCCTCAC GCCTTCGCAC GGGTCTTGCT CGCCGAAGCG
CTGTACCGGG CGTGGTCGGT CAACGCCGGC CACCCCTATC ACCGCGAGTA G
 
Protein sequence
MKLALVAVGQ RLPAWAETAC EDYLKRFPAD WRVELKAVKA EPRTQGKTVD AMKAAEAQRI 
EAACARGVRR VVLDERGTRL TTQQLAQRLQ AWQLDGRDVA LLIGGPDGLA DTLKDGADET
LRLSDLTLPH AFARVLLAEA LYRAWSVNAG HPYHRE