| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A1335 |
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| Symbol | |
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| ID | 4785351 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008825 |
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| Strand | + |
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| Start bp | 1439025 |
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| End bp | 1442111 |
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| Gene Length | 3087 bp |
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| Protein Length | 1028 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640089901 |
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| Product | putative RND efflux transporter |
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| Protein accession | YP_001020532 |
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| Protein GI | 124266528 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.14004 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCTGT CGGAGCTGTT CATCCGCCGT CCGGTGATGA CGGTGCTGCT GAACCTGGCC
ATGGTGGTGG CCGGCGTCAT CGCCTACCGG CAGATCCCGA TCGCCGCACT GCCGAGCTAC
AACACCCCGG TGATCAACGT CACGGCCTCG CTGCCCGGTG CCAGCCCCGA GACCATGGCC
ACCTCGGTGG CGCTGCAGTT GGAGAAGCAG TTCTCGACGA TCCCCTCGCT CAGCATGATC
AGCTCGACCA GCACGCTGGG CACCACCTCG CTGACGCTGG AGTTCGACGA GGGCCGCGAC
ATCGACGCGG CGGCGGTCGA CGTGCAGGCG GCGCTGCTGC GTGCCGAACG CACGTTGCCG
CAGGACATGA CCGCGCCGCC GTCCTATCGC AAGGTCAACC CGGCCGACGC GCCGGTGCTG
CTGATGGCGA TGACCTCGCC CTCGCTGAAC CTGTCGGACC TGAACGACTA CGCCGAGCAC
CTGATCTCGC CCGCGCTGTC CACGCTGCCT GGCGTGGCGC AGGTCAACAT CTTCGGCCAG
CGACGCTTCG CGGTGCGGGT GAGGGTGCAC CCGCAGGCGC TGGCCGCGCG CGACATCGCG
ATCGAGGAGC TGAGTGCGGC GCTCGCCACC GCCAATGCCA ACACGCCGGT CGGCACGCTC
GAGGGCGACC GCCAGACGCT GACGGTGCAG GCCAACCGGC AGCTGCGCAA CGCGGCCGAG
TTCTCCGACC TGATCGTCAG CAGCAAGAAC GGCAACACGG TGCGGCTGCG CGACGTGGCG
ACCGTGGAGG ACAGCTACGA GAGCGTCAAG ACCTCGGCCA ACTTCAACGG CGAGGCGTCG
ATCACGCTGG CCGTGCAGCG CCAGCCCGAC GCCAACACCG TGGCGGTGGT GGATGCGGTC
AAGGCCGCGC TGCCGGGCTT CACCGCACAG CTGCCGCAGT CGATCCAGCT GAGCCTGCTG
AACGACCGCT CCACCTCGAT CCGCGAGGCA CTGCACGACG TGAACCTCAC GCTGCTCGGC
ACCATCGTGC TGGTGGTGCT GGTGATCTTT CTCTTCCTGC GGAGAGCGGT CGCGACGGTG
ATCCCGACGC TGTCGCTGCC GGTGTCGCTG ATCGGTGCGG TGGCGCTGCT GTGGGCCGGC
GGCTACAGCC TCGACAACAT CTCGCTGCTG GGCCTGACGC TGGCCGTGGG CCTGGTGGTG
GACGACGCGA TCGTGATGCT CGAGAACATC ATGCACCACG TCGAGCAGGG CATGGACCCG
TTCGAGGCGG CGTTGAAGGG CTCGCGCGAG GTCGGCTTCA CCATCATCTC GATCTCGACC
TCGCTGGTCG CGGTGTTCAT CCCGATCTTC TTCATGCCCG GCGTGATCGG CCTGCTGTTC
CACGAATTCG CGGTGATCGT CTCGCTGGCC ATCCTGGTGT CGGCCTTCGT CTCGCTGACC
CTGGTGCCCA TGCTGGCCGG ACGCTACCTG AAGCCCGAGG CCACGCAGCG CCCGCCGGGT
GCGCTGGTGC GCGGCTTCGA GCGCGGCTTC GAGGCCGTCA CGCGCTGGTA CACGCGCTCG
CTCGACCTCG CGCTGCGGCA CCGCCGTCTG ATGCTGGGTG TGGGCGTGCT GACCTTCGCG
CTGACCGCGC TGATGTTCGT CACCATTCCC AAGGGATTCT TCCCGGAGGA GGACATCGGC
CAGATCCGCG CCTCCACCGA AGCCGCCGAG GACACCTCGT TCGCGGCGAT GGTGAAGCTG
CAGGACCAGG CGGTGCAGGT GATGCTGGCC GACCCGAACG TGCTGAGCGT GAACTCGGTC
AACGGCGGCA GCGGCACGCA GAACACGGGC CGCATGTTCA TCAACCTCAA GCCGCGCGGC
GAGCGCCTGC CCATGAAGCA GGTGGTGGAA GGGCTGCGCA AGAAGTTGAG TCAGGTGGCC
GGTATCACCG TCTACCTGCA GCCGGTGCAG AACCTGCAGC TCGGCGGGCG CCCCAGCAAG
AGCCGCTACC AGTACATCCT GCAGAGCGTG AAGGCCGATG AGCTGAACGA CTGGGCGGCC
AGGCTGCAGG AGAAGCTGCG CGCCGATCCG CGCTTCCGCG ACGTCACCTC CGACTCACAG
CTCAAGGGAC TGCAAGCCTC GCTGAAGATC GACCGCGACA AGGCCAACAC GCTGGGCGTG
TCGGTCGACT CGATCCGCAA CGCGCTGTTC AGCGCCTTCG GCGAGCGCCA GGTCGCCACC
ATTTACACCA CCGCCGACAG CTACCAGGTG ATCATGGAAG TGGCGCCCGA CGCCAAGCGC
GACGAGAGCG CCTTCGACGG CATCTACCTG CGCAGCAGCA ACGGTGCACT GGTGCCGCTG
AACAGCTTCG CGACGGTCGA GCGCACGCTG GGGCCGACCT CGGTGAACCA CGTCGGGCAG
CTGCAGGCGG TGACGGTGTC GTTCAACCTC GCGCCGGGCG TGCCGCTCGG CGATGCCACC
CGGCAGCTCG AGGCCTACGG GCAGGAGATC CGCCTGCCGG CATCGGTGAT CACCAGCTAC
GGCGGTGACG CAGCGGTGTT CAAGACCTCG CAGGGCAGCC AGGCCATCCT CATCGTTGCG
GCGTTGCTGG TGATCTACGT GCTGCTGGGC GTGCTGTACG AGAGCTACAT CCACCCGCTG
ACCATCCTGG CCGGCCTGCC ATCGGCCGCG GTGGGGGCCT TGCTGATGCT GGAGTTCTTC
GGGCAGGACC TGACGCTGAT CGCGACCATC GGCATCCTGC TGCTGATCGG CATCGTGAAG
AAGAACGCGA TCATGATGAT CGACTTCGCG CTCGACGCGC AGCGCCATCA GGGCATGGCG
CCCGAGGCAG CGATTCGCGA AGCCTGCGTG CGGCGCTTCC GGCCGATCAC GATGACCACG
CTGGCCGCGC TGATGGGCGC GCTGCCCATC GCGCTGGGCA TCGGCGCCGG CGCCGAGCTG
CGGCAGCCGC TGGGTCTGGC GGTGGTGGGC GGCCTGCTGT TCTCGCAGGC GATCACGCTC
TACCTCACGC CGGTGATCTA CCTCTACCTC GACCGCTACA GCGGTCGTGG GCCGATCCAG
ACGCCGGAGG TCGTGGAAGC CCGCTGA
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| Protein sequence | MNLSELFIRR PVMTVLLNLA MVVAGVIAYR QIPIAALPSY NTPVINVTAS LPGASPETMA
TSVALQLEKQ FSTIPSLSMI SSTSTLGTTS LTLEFDEGRD IDAAAVDVQA ALLRAERTLP
QDMTAPPSYR KVNPADAPVL LMAMTSPSLN LSDLNDYAEH LISPALSTLP GVAQVNIFGQ
RRFAVRVRVH PQALAARDIA IEELSAALAT ANANTPVGTL EGDRQTLTVQ ANRQLRNAAE
FSDLIVSSKN GNTVRLRDVA TVEDSYESVK TSANFNGEAS ITLAVQRQPD ANTVAVVDAV
KAALPGFTAQ LPQSIQLSLL NDRSTSIREA LHDVNLTLLG TIVLVVLVIF LFLRRAVATV
IPTLSLPVSL IGAVALLWAG GYSLDNISLL GLTLAVGLVV DDAIVMLENI MHHVEQGMDP
FEAALKGSRE VGFTIISIST SLVAVFIPIF FMPGVIGLLF HEFAVIVSLA ILVSAFVSLT
LVPMLAGRYL KPEATQRPPG ALVRGFERGF EAVTRWYTRS LDLALRHRRL MLGVGVLTFA
LTALMFVTIP KGFFPEEDIG QIRASTEAAE DTSFAAMVKL QDQAVQVMLA DPNVLSVNSV
NGGSGTQNTG RMFINLKPRG ERLPMKQVVE GLRKKLSQVA GITVYLQPVQ NLQLGGRPSK
SRYQYILQSV KADELNDWAA RLQEKLRADP RFRDVTSDSQ LKGLQASLKI DRDKANTLGV
SVDSIRNALF SAFGERQVAT IYTTADSYQV IMEVAPDAKR DESAFDGIYL RSSNGALVPL
NSFATVERTL GPTSVNHVGQ LQAVTVSFNL APGVPLGDAT RQLEAYGQEI RLPASVITSY
GGDAAVFKTS QGSQAILIVA ALLVIYVLLG VLYESYIHPL TILAGLPSAA VGALLMLEFF
GQDLTLIATI GILLLIGIVK KNAIMMIDFA LDAQRHQGMA PEAAIREACV RRFRPITMTT
LAALMGALPI ALGIGAGAEL RQPLGLAVVG GLLFSQAITL YLTPVIYLYL DRYSGRGPIQ
TPEVVEAR
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