Gene Mpe_A1307 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpe_A1307 
Symbol 
ID4785029 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylibium petroleiphilum PM1 
KingdomBacteria 
Replicon accessionNC_008825 
Strand
Start bp1413138 
End bp1414610 
Gene Length1473 bp 
Protein Length490 aa 
Translation table11 
GC content70% 
IMG OID640089873 
Producthypothetical protein 
Protein accessionYP_001020504 
Protein GI124266500 
COG category[R] General function prediction only 
COG ID[COG4784] Putative Zn-dependent protease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.31128 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.470451 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGACAGT ACTTCCTGCC CCTGCTGCTG GCTACCGGCC TGCTGGCTTC GTGCGCCACG 
GTGGTGAACC CTGTCACCGG CCGCGAGGAG CGCTCGGTGA TGAGCGAGGA GGCCGAGATC
GCCGAGGGCA AGAAGGCCCA CCAGCAGGTG CTGGCCGAGT ACGGCGTCTA CGGCGACGCC
AAGGTCCAGT CCTACGTCGA CGACCTGGGC CAGCGTCTCG CGAAGCAATC GCACCGTGCC
CACCTGCAGT GGACCTTCAC GGTGCTCGAC AGCCCCGAGA TCAACGCCTT CGCGCTGCCG
GGCGGCTACG TCTATGTGAC GCGCGGGATC ATGGCCTACA TGGAGAGCGA GGCCGACCTG
GCGGGCGTGA TCGGCCACGA GATTGGCCAC GTGACGGCGC GCCACGGCGC GCAGCGGGCC
ACCCGCCAGC AGACTGCCGG CATCGGCGTG CTGGCGGCGA GCGTGCTGGG CGCAGTGCTG
GGCGTGGGCG ACGTGGCGAG CCAGGTCTCG CAGAGCGTGG CCGCCGGCTA CGTGGCGTCG
TACAGCCGAG AGCAGGAGCT GCAGGCCGAC CAACTGGGCG CCGAGTACCT GTCGCGCAAC
CGCTACGACC CGCAGAACAT GGTCGACGTG ATCCGGGTGC TCAAGCGCCA GGAGCAGTTC
GCCGCCGACC AGGCCAAGGC CGAAGGTCGC ACGCCGCGTC AGGGCGGCGA CTGGCTGGCC
TCGCACCCGA GCAATGAGCA GCGCCTGCAG CAGATCACGC AGATCGCCGC CGGCTACAAG
GGCAGCGGCT ACGTCGACGA CGGACGCGCG CGCTACCTGC AGGCCGTCAA CGGCCTGCCG
TTCGGCGACA GCCGCGAGCA GGGCGTGACG CGCGGGCGCA ATTTCTATCA CGAGCCGCTG
GGCATCGCGC TCACCGCGCC GCAGGGCTGG AAGATCCAGA ACGCGCAGGA CGCCGTGACG
GTGGTCAACG CCACTGGAGA CGCCGGGCTC ATCATGCAGA CCGTGCCCGA CAAGGCCGGC
AGGAGCCACG AAGAGATCAT CCGCAACCTC ATCAAGCCGA CCCAGGGGCG CACCGAGCCG
CTGTCGCTGA ACGGCCTGAG CGCCACGCAT TTCGTCGGTG CGCGCCAGAA CCAGCAGGGC
CAGACGCAGA ACGTCGAGGC CACGCTGGTG ACCGGTCCGG GTGCCAAGAA CTATGCGCTG
CTGTATGCGG CCAAGAACGC CACCGCGCTG CAGAACGCCC GTCCGCAGCT GCGCGAGACC
GAAGGCTCGT TCCGCGCGCT CACCGCGGCG GACCGCAGCG CGGCCCGGCC GTGGGTGCTG
AAGTCCGTGG CCTATCCGCG GGGCGGTTTC GCCGAGCTGG CCCGCCGCTC GCCGCTCGGC
GGCAACGCGG AGCAGCAGCT GCGCCTGATC AATGGCCTCT ACGGCGCGAC CGACGAGCCC
AAGGCCGGCC AGCTGGTGAA GGTGGTGGAG TAG
 
Protein sequence
MRQYFLPLLL ATGLLASCAT VVNPVTGREE RSVMSEEAEI AEGKKAHQQV LAEYGVYGDA 
KVQSYVDDLG QRLAKQSHRA HLQWTFTVLD SPEINAFALP GGYVYVTRGI MAYMESEADL
AGVIGHEIGH VTARHGAQRA TRQQTAGIGV LAASVLGAVL GVGDVASQVS QSVAAGYVAS
YSREQELQAD QLGAEYLSRN RYDPQNMVDV IRVLKRQEQF AADQAKAEGR TPRQGGDWLA
SHPSNEQRLQ QITQIAAGYK GSGYVDDGRA RYLQAVNGLP FGDSREQGVT RGRNFYHEPL
GIALTAPQGW KIQNAQDAVT VVNATGDAGL IMQTVPDKAG RSHEEIIRNL IKPTQGRTEP
LSLNGLSATH FVGARQNQQG QTQNVEATLV TGPGAKNYAL LYAAKNATAL QNARPQLRET
EGSFRALTAA DRSAARPWVL KSVAYPRGGF AELARRSPLG GNAEQQLRLI NGLYGATDEP
KAGQLVKVVE