Gene Mpe_A1284 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpe_A1284 
Symbol 
ID4785006 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylibium petroleiphilum PM1 
KingdomBacteria 
Replicon accessionNC_008825 
Strand
Start bp1382311 
End bp1385058 
Gene Length2748 bp 
Protein Length915 aa 
Translation table11 
GC content74% 
IMG OID640089850 
ProductDNA helicase/exodeoxyribonuclease V, subunit B 
Protein accessionYP_001020481 
Protein GI124266477 
COG category[L] Replication, recombination and repair 
COG ID[COG2887] RecB family exonuclease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.155997 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGCAGTT CGCACGAGCT TCCAGGGCAC AATGATTTTG ACACAAGGCC CCCTGGCGCG 
CCGCGCGGCG CCGGCCCTGC ACGCTATGGG GACGATAGAA GGATCCCGCC CCTGAATCCG
ACACCGGACC CTGCCGCCAA GGACATGCCA CCCGAGGCCG ACCTGGCGGT CGCCGCATGC
TGGACGCGCC TAGTGCGCGA GATCGCGGCG TTTTCGCGCC GCGAGGCCCT TGCATCGCGG
GATGTCGTCG TGCTGCTGCC CTTTGCTCAG CATCTTTCGT TGGCGCGGGC CGCCTGGCTG
GCGCTCGACC ACGCGCCCTG GATACCGCGT TTCGAGACGA CGCAGACCTT GCAGCGTTCG
CTCGGTCCAC CGCTGCCGGC CGCACCAGGC GAACTGGCTT TCGATCCGGT GGCCGATCCG
CTGCAGGCCG CACAACTGCT GCGCGAGCAG GTTCCGGATT GGCCGCATCG CGACCCGCGC
GGCTTCGCGC TCGCCGTCGC GCGCCTGAAC GAGACGGCGC AGGTGCTGGC GCGCGCCAGG
CTGGCGCTGC CGCCGGCCCA GCGCGCGGCT TGGCTCGAGA AGGCCCGTTC GCTGCTGTCC
GGCCCCACCG GGCCGGGCCA GCAGGAGCGC GCGCTGGCGC GGCTCGCGCT CGAGTGGTCG
AACACGGCGG CCACGATGGG CGCCGATGCG CTCTACGCCC TGAGGCCGGC GGCCTGGGTC
GCACTGCGGG TCGGCGCCTC CGATCCGCTG GTCGAGTCCT TGTTGGCCGC ATCGTCGGAA
CCGGTGCTGT GGCTCGATGC CGATCTGCGT GCCCCCGGCC TTCGCAGTGT TCCCGGTGCA
GTGCAGGTGA GCGAGTGCGA CGATTTCGAG GACGAGGCGC AGCGGGCGGC GGCGCAGGTG
CTGGCTCATC TGGCGCAGGG CGAGCAGCCG GTGGCCCTGG TGGCCCTTGA CCGCGTGCTG
GTGCGTCGCG TGCGAGCGCT GCTCGAGCGG CAGCAGGTTC CGGTGAGCGA TGAGACGGGC
TGGAAGCTGT CGACCACCCG TGCAGGCGCC ACGGTGATGG GCCTGCTGCG CGCGGTGCAT
CCCCGCGCAG CGACCGACGA CCTGCTCGAC TGGCTGGCCT CGGCGCCAGC CCCGGTGGAT
GGCCGTGCGG CGCTCGATGC CGCGTGGCGA CGCGACGGCA TCACCGCGTT GCGGCAGGTC
GACGAGGCCC GCCTCGAGCC TGCTGCGCTC GCCCTTTGGC AGCAGTGGCT CGCGATCGGC
GAGCCCTTGA GCGCAACCCG CCGCCTGGCG CTGGGCGAAT GGCTGTCCCG CCTGCGCGAG
GCGCTGCTGC GCGCCGGGCT GTGGGAGTCG CTGCTGGGCG ACGCGGCCGG TCGGCAAGTC
ATCGATGCGC TGCGGTGCCG CGCCGAGCCA CCGGCCGGCA GCGCCTGGGG GCAGCAGGCG
GCGCGCGTGC GCTTCGATGC CGACGGCTTG CGCGACTGGG TCGACGGCGT GCTGGAGGCG
GTTTCATTCG AGCCGCCGTC GCCCGACCTC GGCGGTGCGG CGCCGGTGAT CCTCACGCCG
CTGGCGCGCG CGATGCTGCG TCCGTTCGCA GCGGTCGTGT GTCCGGGTGC GGATGCGGCG
CATCTCGGCG CGCTGCCGAA GCCGCAGGCC TTGCTGGGCG ACGCACTGGC GGCCGCGCTC
GGCCTGCCGT CGAGCGCGCA GCGTCGCGAG CACGAGCGAC GGGCCTTCGC GCAGTTGCTG
CGGGTGCCGC AGCTCACGCT GCTGCACCGC CGGCGCGACG GGGCCGAGCC GCTGCAGGCC
AGCCCGCTGT TGCTGCAACT GCAGTTCGAC GCACGCGAAG CCGTCAGGTC GGGCGGTGAG
CCGCGGACGC CCGTCGCCGT CGTGCCGCGC CCGCTCGCGC ACCCCTTGCC GGTCGCGCCG
GCGCTGTTGC CCGACTCGCT CAACGCCACG GCCTACGAAG CGCTGCGCGC CTGTCCCTAT
CGCTTCTTCG CGCAGCGCCT GCTGGGCCTG GCCGAAGCCG AGGAACTCGA CGACGCCGTC
GACAAGCGCG ACTACGGCAC GTGGCTGCAT GCGGTGCTGC AGGACTTCCA CCGCCAGCGG
CAGCCCGGTG CGCCGCAGGA CGATGCCGCC TTGCTGCTGC GCATTGCCCG CGCGCGGCAG
GCGCTGCTGG CGCGAGACGA TGCCGATTTC CTGCCGTTCG CCGTGTGGTT CGAGGACCTG
CTGCCGCGCT ACCTCGCCTG GTGGCATGCC GAAGAGGCGC TGGGCGCGAA CGTGATCGAT
ACCGAACTCG AACTGCTAGC ACAGCCGCCA GCGCTGGCGG CCGCCGGCCT GCGCCTGCGC
GGCACGCTGG ACCGCATCGA TGCCGTGCCG GGCAAGGGGG GCCACGGTGC GCACCGCATC
CTCGACTACA AGACCTCCAG CGAGACCACC CTGCGCGAGC GCCTGCGGCA GCCGCTCGAG
GACACCCAGC TGCCGTTCTA CGCCGCGCTG CTGGACGCGT CGCGCGGCGT CCCGCCAGGC
GACGTGCAGG CCGCCTACCT GTCGCTCGAC GGGCGCGAGG GCGTGAAGCT GCTGGCGCAT
CCCGACGTGG CCGCCAGCGC CGCGACGCTG CTCGAAGGCA TCGCGGCCGA CTTCACGCGC
CTGCAGGCCG GCGCGCCGAT GCCGGCGCTG GGCGAGGGCA GCGCCTGCGA GCACTGCAGC
GCACGCGGCC TGTGCCGGCG CGACCACTGG CGCGAGGACC GGGCATGA
 
Protein sequence
MRSSHELPGH NDFDTRPPGA PRGAGPARYG DDRRIPPLNP TPDPAAKDMP PEADLAVAAC 
WTRLVREIAA FSRREALASR DVVVLLPFAQ HLSLARAAWL ALDHAPWIPR FETTQTLQRS
LGPPLPAAPG ELAFDPVADP LQAAQLLREQ VPDWPHRDPR GFALAVARLN ETAQVLARAR
LALPPAQRAA WLEKARSLLS GPTGPGQQER ALARLALEWS NTAATMGADA LYALRPAAWV
ALRVGASDPL VESLLAASSE PVLWLDADLR APGLRSVPGA VQVSECDDFE DEAQRAAAQV
LAHLAQGEQP VALVALDRVL VRRVRALLER QQVPVSDETG WKLSTTRAGA TVMGLLRAVH
PRAATDDLLD WLASAPAPVD GRAALDAAWR RDGITALRQV DEARLEPAAL ALWQQWLAIG
EPLSATRRLA LGEWLSRLRE ALLRAGLWES LLGDAAGRQV IDALRCRAEP PAGSAWGQQA
ARVRFDADGL RDWVDGVLEA VSFEPPSPDL GGAAPVILTP LARAMLRPFA AVVCPGADAA
HLGALPKPQA LLGDALAAAL GLPSSAQRRE HERRAFAQLL RVPQLTLLHR RRDGAEPLQA
SPLLLQLQFD AREAVRSGGE PRTPVAVVPR PLAHPLPVAP ALLPDSLNAT AYEALRACPY
RFFAQRLLGL AEAEELDDAV DKRDYGTWLH AVLQDFHRQR QPGAPQDDAA LLLRIARARQ
ALLARDDADF LPFAVWFEDL LPRYLAWWHA EEALGANVID TELELLAQPP ALAAAGLRLR
GTLDRIDAVP GKGGHGAHRI LDYKTSSETT LRERLRQPLE DTQLPFYAAL LDASRGVPPG
DVQAAYLSLD GREGVKLLAH PDVAASAATL LEGIAADFTR LQAGAPMPAL GEGSACEHCS
ARGLCRRDHW REDRA