| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A1282 |
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| Symbol | rho |
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| ID | 4785004 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008825 |
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| Strand | - |
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| Start bp | 1380455 |
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| End bp | 1381747 |
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| Gene Length | 1293 bp |
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| Protein Length | 430 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640089848 |
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| Product | transcription termination factor Rho |
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| Protein accession | YP_001020479 |
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| Protein GI | 124266475 |
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| COG category | [K] Transcription |
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| COG ID | [COG1158] Transcription termination factor |
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| TIGRFAM ID | [TIGR00767] transcription termination factor Rho |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0183251 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.109355 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGTCACGC TTGCCCCCGA GGTGCGCTTC ATGCATCTAT CCGAACTCAA AGCCCAGCAC
ATATCCGAAC TGATCAAGGT CGCCGAAACC TTGGAGATCG AGAACAGCGC CCGCATGCGC
AAGCAGGAGC TGATGTTCGC GATCATGAAG AAGCGCGCCA AGCAGGGCGA GCAGGTGTTC
GGCGACGGCG TGCTGGAAGT GCTGCCCGAT GGCTTCGGCT TCCTGCGCTC CCCCGAGGCG
AGCTACCTCG CGAGCACCGA CGACATCTAC CTCAGCCCCA GCCAGATCCG CCGCTTCAAC
CTGCACACCG GCGACATGAT CGAAGGCGAG GTGCGCGTCC CCAAGGACGG CGAGCGCTAC
TTCGCCCTGG TGAAGGTGGA CATCGTCAAC GGCATCACGC CGGAGGAGAA CAAGCAGAAG
ATCATGTTCG AGAACCTGAC GCCCTTGTTC CCCAAGGAGC AGTTCAAGCT CGAACGTGAC
ATCAAGGCCG AGGAGAACAT CACCAGCCGC ATCGTCGATC TGATCGCCCC GCTGGGCAAG
GGCCAGCGGG CGCTGCTGGT GTCGGCCCCG AAGAGTGGCA AGACGGTGAT GATGCAGAAC
CTCGCGCACG CCATCACCGC CAACTACCCA GAAGTGCACC TGATCGTGCT GCTGGTCGAC
GAGCGGCCCG AGGAAGTGAC CGAGATGCAG CGCACGATCC GCGGCGAGGT CATCAGTTCC
ACCTTCGACG AGCCCGCCGC ACGCCACGTG CAGGTGGCCG AGATGGTGAT CGAGCGCGCC
AAGCGGCTGG TGGAGCTGAA GAAGGACGTG GTGATCCTGC TCGACTCGAT CACCCGCCTG
GCGCGCGCTT ACAACAACGT GCTTCCCTCC TCCGGCAAGG TGCTGACGGG TGGCGTCGAT
GCCAATGCGC TGCAGCGCCC CAAGCGCTTC TTCGGCGCCG CGCGCAACAT CGAGGAAGGC
GGTTCGCTGA CCATCATCGG CACCGCGCTG GTCGACACCG GCAGCCGCAT GGACGAGGTG
ATCTACGAGG AGTTCAAGGG CACCGGCAAC TGCGAGATCC ACCTGGATCG CCGCATGGCC
GAGAAGCGCG TCTACCCGTC GATCCTGCTG AACAAGTCGG GCACCCGCCG CGAGGAGCTG
CTGCTCAAGC CAGAGATCCT GCAGAAGACC TGGATCTTGC GCAAGCTGCT CTATTCGATG
GACGAGATCG AGGCGATGGA GTTCATCCTC GACAAGATGA AGGCCACGAA GACCAACCTC
GACTTCTTCG ACATGATGCG CCGCGGCGGC TGA
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| Protein sequence | MVTLAPEVRF MHLSELKAQH ISELIKVAET LEIENSARMR KQELMFAIMK KRAKQGEQVF
GDGVLEVLPD GFGFLRSPEA SYLASTDDIY LSPSQIRRFN LHTGDMIEGE VRVPKDGERY
FALVKVDIVN GITPEENKQK IMFENLTPLF PKEQFKLERD IKAEENITSR IVDLIAPLGK
GQRALLVSAP KSGKTVMMQN LAHAITANYP EVHLIVLLVD ERPEEVTEMQ RTIRGEVISS
TFDEPAARHV QVAEMVIERA KRLVELKKDV VILLDSITRL ARAYNNVLPS SGKVLTGGVD
ANALQRPKRF FGAARNIEEG GSLTIIGTAL VDTGSRMDEV IYEEFKGTGN CEIHLDRRMA
EKRVYPSILL NKSGTRREEL LLKPEILQKT WILRKLLYSM DEIEAMEFIL DKMKATKTNL
DFFDMMRRGG
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