| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A1279 |
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| Symbol | |
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| ID | 4785001 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008825 |
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| Strand | - |
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| Start bp | 1376857 |
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| End bp | 1378236 |
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| Gene Length | 1380 bp |
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| Protein Length | 459 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 640089845 |
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| Product | putative inner membrane transmembrane protein |
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| Protein accession | YP_001020476 |
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| Protein GI | 124266472 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0284384 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.285043 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCGGCG CGGGGACCAC CGGACGCATC GCGCGCCACG CCACATCGAT CCTGGTCGGC
CAGGTGGCGG TGATCGGCTA CACCGTGGCA GACACGGTGA TGACCGGTCG TCACGACAGC
ACCGATCTGG CCGCGCTGTC GATCGGGGCA GCGGTCTACA TCTGCGTCTA CATCGCGCTG
ACCGGCGTGC TCCAGGCGCT GATCCCGGTG GTGGGCCACC ATCACGGTGC GGGCGACCAC
GAAGGCGTCC GCCGCAGTTT CCAGCAGGGC GTGTGGCTGG CGCTGGCGAT CGCACTGCCG
GGCATGACCG TGCTGCTCTT CCCCGGCCTG GCGCTGAGCT GGGCCCGGAC GGATGCGGCG
GTGCTCGAGC GCGTGCAGTC CTACCTCGGC TGGCTGGCCT GGTCGCTGCC GGCGGGCCTG
CTGTTCCGTG TCTACAGCGG CCTCAACCAG GGCCTGTCGC GGCCGCTGCT GGTCACCTTG
CTCCAGCTGA TGGCGCTGGG CCTCAAGCTG CCGCTCAACG CCTGGCTGAT CTTCGGAGGC
GCCGGCGTGC CGGCGCTCGG TGTGGCCGGA TGCGCGATCG CCACGCTGAT CGTGCAGTGC
ACGCTGGCCG GCGTGGCCGC GCTGATGCTG ATGCGTCATC CGGCCTATCG CGAACTGCAG
CTGTTCGCCC GCTGGTCACG GCCGCGCTGG GACGCGCAGC GCGAACTGCT GCGGCTCGGC
CTGCCCAGCG GGGCGGCCCT GTTCTTCGAA GTGACCGGCT TCGCGCTGAT GGCGGTGTTC
ATCGCCCGAC TGGGCACCAC GCCGCTGGCG GGACACCAGA TCGCCGCCAA CGTGGCGGCG
GTGCTGTACA TGCTGCCCTT GTCGATCGGC ATCGCCACCG GCGCCCAGAC TGCGCAAGCC
CTCGGCGCCG GCGACCGCAC GCAGGCGCGG CGCATCTGGC GGCAGGGCCT GTGGCTCGCG
CTGGCGCTGG TGGCGATGCT CGGTGCACTG CTGGCCGGGC TGCGCGGCCC GCTCGCGCGC
GCCTACAGCC CGGACCCGGC CGTGCAGGCC GTGGCCACCC AGCTGCTGTT GTTCGTCGCC
GCGAGCCAGC TCGCCGACGC CACTCAATGC ATTGCCTCCT TCGCGCTGCG CGCCTACCGC
ATCGCGCTGC TGCCGGCGTT GAGCTATGCG ATCGGGCTGT GGGGCATCGG CCTGGCCGGT
GGGGCCTGGC TCGCCTTCAG CCCGCCACCG GTCTGGCCGA ACGCGCTGGC GGGCCCGGCC
GCGTTCTGGC TGGCCAACGT GGTGGCGCTC GGCTGCGTCA GCGCGCTGCT GCTGGCCCTG
CTTCAGCGCG TGTCGGCCGT GAGGCCGCCC ACGGGGACCC CCGGGTCGCT GGCCGGCTGA
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| Protein sequence | MSGAGTTGRI ARHATSILVG QVAVIGYTVA DTVMTGRHDS TDLAALSIGA AVYICVYIAL
TGVLQALIPV VGHHHGAGDH EGVRRSFQQG VWLALAIALP GMTVLLFPGL ALSWARTDAA
VLERVQSYLG WLAWSLPAGL LFRVYSGLNQ GLSRPLLVTL LQLMALGLKL PLNAWLIFGG
AGVPALGVAG CAIATLIVQC TLAGVAALML MRHPAYRELQ LFARWSRPRW DAQRELLRLG
LPSGAALFFE VTGFALMAVF IARLGTTPLA GHQIAANVAA VLYMLPLSIG IATGAQTAQA
LGAGDRTQAR RIWRQGLWLA LALVAMLGAL LAGLRGPLAR AYSPDPAVQA VATQLLLFVA
ASQLADATQC IASFALRAYR IALLPALSYA IGLWGIGLAG GAWLAFSPPP VWPNALAGPA
AFWLANVVAL GCVSALLLAL LQRVSAVRPP TGTPGSLAG
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