| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A1255 |
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| Symbol | |
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| ID | 4785832 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008825 |
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| Strand | + |
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| Start bp | 1352328 |
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| End bp | 1353359 |
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| Gene Length | 1032 bp |
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| Protein Length | 343 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640089821 |
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| Product | RNA polymerase sigma S (sigma-38) factor transcription regulator protein |
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| Protein accession | YP_001020452 |
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| Protein GI | 124266448 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02394] RNA polymerase sigma factor RpoS
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.286023 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCACA GGAAGCACTC TCCGCCCGGC AACGGACACG CGCTTCCTGA TGCGAGGGCC
CTGCCGCACG GGGCCTGGCC GGTCGAGCCG ACGCATGGTG GTGGAGATCC GCCGAATGGT
GCGGACGACC TGCCGGAGCC GGTGCAGGAG CACCTGCCGA TCGCTGCCGG CGAAGGCGAG
GTTGGCAACA CGCTGCAGAC CTATCTGCGC GAGATCCGGC GAGCGCCCCT GTTCACGCCC
GACGAGGAAT TCGCGATGGC CACGCGCGCC CGGGCCGGCG ACTTCGCGGC GCGGCAGCAG
ATGATCGAGC GCAATCTGCG GCTCGTGGTC AGCATCGCCA AGAGCTACCT CAGCCGCGGC
CTGCCGATGA CCGACCTGAT CGAGGAAGGC AACCTCGGCC TGATGCACGC GATTGGCAAG
TTCGAGCCTG AACGCGGCTT TCGCTTCTCG ACCTACGCCT CGTGGTGGAT CCGCCAGAGC
ATCGAGCGCG CGATCATGCA CCAGGCCCGC CTGGTGCGGC TGCCGGTGCA TGTGGTGCGT
GAACTCAACC AGGTGCTCAA GGCGCGCCGT GCGCTGGAGG GCGAAGCCGC AGCGAGCGCC
GACGGGCGGA CCGTCCGCGT CGACGAGATC GCTGCAGCGT TGGGGCGCCC GGTGACCGAG
GTGTCCGAAC TGCTGCGATT TGCCGAGCAG CCCACGTCGC TCGATGCGCC GCTCGAGCGC
CAGGCAGGCA ATGGGGCCGA GACGCTGGGC GACATGGTGG CCGACGAGCA GGCCACGGAC
CCGCTGGGCC ACACGCTGAA CCATGAACTC GACGTGCTGC TGGAGCATGG TTTGGGCGAA
CTGAGCGAAC GCGAGCGCGA GGTGCTGGCT GGGCGCTATG GATTGCACGA CAGGGAACCC
GAGACGCTGG AGGTACTTGC CGAGCGGCTG GGCCTGACGC GCGAGCGTAT CCGCCAGATC
CAGCAGGAGG CGCTGCTCAA GCTCAAGCGC CGGATGGCAC GCAACGGCGT CAACCGCGAC
TCGATCTTCT GA
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| Protein sequence | MNHRKHSPPG NGHALPDARA LPHGAWPVEP THGGGDPPNG ADDLPEPVQE HLPIAAGEGE
VGNTLQTYLR EIRRAPLFTP DEEFAMATRA RAGDFAARQQ MIERNLRLVV SIAKSYLSRG
LPMTDLIEEG NLGLMHAIGK FEPERGFRFS TYASWWIRQS IERAIMHQAR LVRLPVHVVR
ELNQVLKARR ALEGEAAASA DGRTVRVDEI AAALGRPVTE VSELLRFAEQ PTSLDAPLER
QAGNGAETLG DMVADEQATD PLGHTLNHEL DVLLEHGLGE LSEREREVLA GRYGLHDREP
ETLEVLAERL GLTRERIRQI QQEALLKLKR RMARNGVNRD SIF
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