Gene Mpe_A1247 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpe_A1247 
Symbol 
ID4785148 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylibium petroleiphilum PM1 
KingdomBacteria 
Replicon accessionNC_008825 
Strand
Start bp1343155 
End bp1344462 
Gene Length1308 bp 
Protein Length435 aa 
Translation table11 
GC content69% 
IMG OID640089813 
Producttransmembrane protein 
Protein accessionYP_001020444 
Protein GI124266440 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3264] Small-conductance mechanosensitive channel 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.072199 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.308743 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCGAC CGATGACCCC CGACGAGCTG AGTGCGCTGG GCAGCGCGCT GCTCACCACC 
AATGCCGCGC TGGAGCTCGC CGTGCTCGGT GGCTGCCTGC TGCTGGCGTG GGCGCTGGCT
CGCACGCTGC GCGGTCGGCG CGAGGATCCC CATTCGGTGC TGTTCGGTCG CCGACTGGTC
GACGGCGCGC TGTTTCCGCT GCTCTCGCTG GGACTCGTGC TGGCCGCGCA GCACCTGCTG
CTGGCGGTGC TGCATCTGCC GCCGGCGGTA CTGCGCATCG CGGTCGCGCT GCTGCTGTCG
CTGGCGCTGA TCCGCGTGTT CGTGCGGGTG CTGCGAGCGG CGTTCCCGGC GTCGGCCTTC
GTGCGCATCG TCGAGCGCTG GCTGTCGTGG GCAGTGTGGA TCGGCATGAT CCTTTGGTTC
ACCGGCGTGC TGCCGATGCT GATGGAAGAG CTGGAAGGCA TCAGCTGGAA GGTCGGCAGC
GATCGCATCT CGCTGCGGGC CCTGCTCGAG GGCGCGTTCA ACGCGGTGAT CGTGCTGATG
CTCGCGTTGT GGCTCAGCGC GGCGATCGAG GCGCGGCTCC TGAAGGGGAG ATTGACCGAC
CTTTCGCTGC GCAAGATCGC GGCGAACGCC ACCCGCGCGC TGCTGCTGTT CGTCGGCCTG
CTGATAGCCC TGTCGGCGGC CGGCATCGAC CTCACCGCGC TCAGCGTCTT CGGGGGGGCG
ATCGGGGTCG GGCTCGGCTT CGGCCTGCAG AAGCTCGCGT CCAACTATGT CAGCGGCTTC
GTGGTGCTGG CCGAGCGCTC GCTGCGGATC GGTGACCTGG TCAAGGTCGA CAACTTCGAG
GGCCGCATCA CCGACATCAA CACGCGCGCG ACGATCATCC GCGCCGCCAA CGGCCGCGAG
TCCATCGTGC CGAACGAGCT GCTGATCACG CAGCGCGTCG AGAACGCTTC GCTGACTGAG
ACCTGTGTCA TGGCCTCGAC GGTGGTTCAG GTCGCCTACG GCACCGACGT CCTGAAGCTG
CGCCCCAAGC TGCTCGCGGC ACTCGGAAGC ATCGAGCGCA TGATGAAGGA CGACAGTCAC
TCGGCGGCGG TCCACCTGAC CAACTTTGCG GCCGACGGTC TGGAGCTGAC CATCTGGTAC
TGGGTGCCGG ACCCGCTGAA CGGCCAGTCC AACCTGCGCT CCGAAGTGAA TCTGGCCATC
CTGGCGGTGC TCGACGCCGA GGGCATCGAG ATCCCGTTCC CGCAGCGTGT GCTGCGGCGC
GTGCCGCCCG CCCACAAGCC GCCATCGGCG GCCTCGCAAC CGCCCTGA
 
Protein sequence
MARPMTPDEL SALGSALLTT NAALELAVLG GCLLLAWALA RTLRGRREDP HSVLFGRRLV 
DGALFPLLSL GLVLAAQHLL LAVLHLPPAV LRIAVALLLS LALIRVFVRV LRAAFPASAF
VRIVERWLSW AVWIGMILWF TGVLPMLMEE LEGISWKVGS DRISLRALLE GAFNAVIVLM
LALWLSAAIE ARLLKGRLTD LSLRKIAANA TRALLLFVGL LIALSAAGID LTALSVFGGA
IGVGLGFGLQ KLASNYVSGF VVLAERSLRI GDLVKVDNFE GRITDINTRA TIIRAANGRE
SIVPNELLIT QRVENASLTE TCVMASTVVQ VAYGTDVLKL RPKLLAALGS IERMMKDDSH
SAAVHLTNFA ADGLELTIWY WVPDPLNGQS NLRSEVNLAI LAVLDAEGIE IPFPQRVLRR
VPPAHKPPSA ASQPP