| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A1246 |
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| Symbol | |
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| ID | 4785147 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008825 |
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| Strand | + |
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| Start bp | 1342170 |
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| End bp | 1343111 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640089812 |
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| Product | putative histone deacetylase-family protein |
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| Protein accession | YP_001020443 |
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| Protein GI | 124266439 |
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| COG category | [B] Chromatin structure and dynamics
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0489566 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.18397 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCACCG CCTACTACTC CCACCCCGCC TGCCGCACCC ATGACATGGG CGATGGCCAC
CCCGAGTGCC CGCAGCGGCT CGACGCCATT GCCGACCACC TGATCGCCAC CGGCCTGGAC
ATCGCGCTCG AGCAGCGCGA GGCGCCGCCG GTCGACGAGG GCACCTTGGC GCTGGCCCAT
GAGTCGCTGT ACGTCGCCAA CCTGCGCGGC TTCATGGAGC AGGTGGAGGC CACCGGCCAG
CGCCGCGCGC TGGACCCCGA CACCGTCGCC GGCCCCGGCA CCTGGGCTGC GGCGCTGCAT
GCGGCCGGGG CCGCGGTGGC GGCGACCGAT GCGGTGCTCG ATGGCGAGAT CGAGAACGCC
TTCTGCGCGG TGCGCCCGCC GGGCCACCAT GCCACCCGGC GCCAGGCCAT GGGTTTCTGC
TTCTTCAACA ACGTCGCCGT CGCGGCACGC CATGCACTCG ACCGGCGCGG GCTGGAGCGT
GTGGCGATCA TCGATTTCGA TGTCCACCAC GGCAACGGCA CCGAGGACAT CATCGCCAAC
GACGATCGCG TGCTGATGTG CAGCTTCTTC CAGCATCCGC TGTACCCGAA CTCCGGGGCC
CAGCCGCTGG GCGACAACAT GGTGAACCTG CCGGTGCCGG CATATACCAA GGGATCCGAG
ATCCGCGAAC TGATCGACCG GCACTGGTTG CCGCGGCTCG AGGCCTTCCG GCCGCAGATG
CTGTTCATTT CGGCGGGTTT CGACGCTCAC CGGGAGGACG ATCTCGGTCA ACTCGGGTTG
GTGGAGAGCG ACTACGCCTG GATCACGCGG CGCCTCAAGG GTGTGGCCGA ACGCCATGCC
GACGGTCGCA TCGTCTCGTG TCTGGAGGGG GGCTACGCAC TGAGTGCGCT GGCGCGCAGC
GTGGCCAGCC ACGTGCGAGT GCTGGCCGGA CTGACCGATT GA
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| Protein sequence | MATAYYSHPA CRTHDMGDGH PECPQRLDAI ADHLIATGLD IALEQREAPP VDEGTLALAH
ESLYVANLRG FMEQVEATGQ RRALDPDTVA GPGTWAAALH AAGAAVAATD AVLDGEIENA
FCAVRPPGHH ATRRQAMGFC FFNNVAVAAR HALDRRGLER VAIIDFDVHH GNGTEDIIAN
DDRVLMCSFF QHPLYPNSGA QPLGDNMVNL PVPAYTKGSE IRELIDRHWL PRLEAFRPQM
LFISAGFDAH REDDLGQLGL VESDYAWITR RLKGVAERHA DGRIVSCLEG GYALSALARS
VASHVRVLAG LTD
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