| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A1211 |
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| Symbol | |
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| ID | 4787058 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008825 |
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| Strand | - |
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| Start bp | 1305915 |
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| End bp | 1307900 |
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| Gene Length | 1986 bp |
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| Protein Length | 661 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640089776 |
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| Product | cytochrome c-type biogenesis protein (CcmF) |
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| Protein accession | YP_001020408 |
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| Protein GI | 124266404 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1138] Cytochrome c biogenesis factor |
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| TIGRFAM ID | [TIGR00353] c-type cytochrome biogenesis protein CcmF |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTCCCG AGCTCGGGCA GATCGCGCTG CTGCTGGCGC TGGCCACCGC CCTGATCCAG
GGCACCCTGC CGCTGCTGGG CGCCGCTCGC GGCCGCGCCG ACTGGATGGC GCTCGCGCGG
CCGGCGGCGC AGACGCAGTT CCTGCTGGTC GCGCTGGCCT TCGGCTGCCT GGTGGCGTCC
TTCGTGCGAC ACGACTTCTC GGTGCTGAAC GTGGCCACCA ACTCGAACAG CGCGCTGCCG
CTGTTCTACC GCATCGCCGC CTCCTGGGGC AGCCACGAGG GCTCGCTGCT GCTGTGGGTG
CTGATGCTCA GCAGCTGGAC GCTCGCGGTG GCGCTGCGCA GCCGCCACCT GCCGGTGCCG
GTGGTGTCGC GCATCCTCGC GGTGATGGGC CTGATCAGCG TGGGCTTCCT GCTGTTCATG
CTGATCACCT CCAACCCCTT CGACCGCCTG TTCCCGGTCC CACCGGACGG CAACGACCTG
AACCCGCTGC TGCAGGACCC CGGCATGATC GTGCACCCGC CGATGCTCTA CATGGGCTAC
GTGGGCTTCT CGGTGGCCTT CGCCTTCGCC GTCGCGGCGC TGCTCGGCGG CACGCTCGAC
GCCACCTGGG CGCGCTGGAC GCGGCCCTGG ACCACCGCCG CCTGGGCCTT CCTGACGCTG
GGCATCATGC TCGGCAGCAC CTGGGCCTAC TACGTGCTGG GCTGGGGCGG CTGGTGGTTC
TGGGACCCGG TGGAGAACGC CTCCTTCCTG CCCTGGCTGG CCGGCACGGC GCTGATCCAT
TCGCTGGCGG TCACCGAGAA GCGCGGCGCC TTCAAGTCCT GGACGGTGCT GCTGGCGATC
GTCGCCTTCT CGCTGTCGCT GCTCGGCACC TTCCTCGTGC GCTCGGGCGT GCTGTCGTCG
GTCCACGCCT TCGCCACGGA CCCGCAGCGC GGCCTGTTCA TCCTGCTGTT CCTGGTCATC
GTGATCGGCG GCTCGCTCAC CCTGTACGCG TGGCGCGCGC CCAAGGTGGG GCTCGGCGCG
CGCTTCGGCG TGGTGTCGCG CGAGTCGATG CTGCTCGCCA ACAACGTGCT GTTCGTCGTC
GCCACGCTGT CGGTGCTGCT CGGCACGCTC TACCCGCTGC TGCTCGACGC CATGGGCCTG
GGCAAGATCT CCGTCGGGCC GCCCTACTTC GACGCCGTGT TCGTGCCGCT CATGGCGCCA
GCGGTGTTCT TGCTCGGCGT GGGGCCGCTG GCGCGCTGGA AGCAGGCCGA ACTGCCCGAC
CTGGCCCGCC GGCTGCGCTG GGCTGCCGCC ATCGCGGTGG TCGCGGCGCT GCTCACGGGC
TGGCTGGCCG GCCGCATCGC GCTGGGCGCG ACGCTCGGCC TGCTGATGAG CTACTGGATC
GTCGCCGCCC TCGGGGTCGA CCTGTGGGAG CGGCTGCGCC CGGCCGGTGG CCTGCCGATG
AGCCTGGCGG CCCGCGCGCG GCAGCTGCCG CGCGCGATGC TCGGCATGAT GCTGGCCCAC
CTGGGCGTGG CGGTGTTCGC CTTCGGCGTG AGCATGGTCA CCACCTACCA GCTCGAGCGT
GACGTGAAGA TGGCGATCGG CGACACCACC GAGGCCGGCG GCTTCGTGTT CGCGCTGCGC
GGCCTGAAGG AGATCCAGGG CCCGAACTAC GACGGCCTGC AGGGCCAGAT CGAAGTCACG
CGCGACGGCA AGGCGGTGGC GCTGCTGAAG CCCGAGAAGC GCATCTACCG CGTGCAGCGC
AACCCGATGA CCGAGGCCGA CATCAACCGC GGCATCACGC GCGACCTCTA CGTGTCGCTG
GGCGAGCCCA CCGCCGACGG CAGCTGGATC GTGCGGGTCT ACTTCAAGCC CTTCGTCAAC
TGGATCTGGG GCGGCTGCGT CCTGATGGCG CTGGGCGGCG CCCTCGCGGC GAGCGATCGG
CGCTACCGCG CCCGGCAGCG CCAGGAGCAC GGGCAGCAGG CCGGCCCGGC CGGAGCGGTG
GCGTGA
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| Protein sequence | MIPELGQIAL LLALATALIQ GTLPLLGAAR GRADWMALAR PAAQTQFLLV ALAFGCLVAS
FVRHDFSVLN VATNSNSALP LFYRIAASWG SHEGSLLLWV LMLSSWTLAV ALRSRHLPVP
VVSRILAVMG LISVGFLLFM LITSNPFDRL FPVPPDGNDL NPLLQDPGMI VHPPMLYMGY
VGFSVAFAFA VAALLGGTLD ATWARWTRPW TTAAWAFLTL GIMLGSTWAY YVLGWGGWWF
WDPVENASFL PWLAGTALIH SLAVTEKRGA FKSWTVLLAI VAFSLSLLGT FLVRSGVLSS
VHAFATDPQR GLFILLFLVI VIGGSLTLYA WRAPKVGLGA RFGVVSRESM LLANNVLFVV
ATLSVLLGTL YPLLLDAMGL GKISVGPPYF DAVFVPLMAP AVFLLGVGPL ARWKQAELPD
LARRLRWAAA IAVVAALLTG WLAGRIALGA TLGLLMSYWI VAALGVDLWE RLRPAGGLPM
SLAARARQLP RAMLGMMLAH LGVAVFAFGV SMVTTYQLER DVKMAIGDTT EAGGFVFALR
GLKEIQGPNY DGLQGQIEVT RDGKAVALLK PEKRIYRVQR NPMTEADINR GITRDLYVSL
GEPTADGSWI VRVYFKPFVN WIWGGCVLMA LGGALAASDR RYRARQRQEH GQQAGPAGAV
A
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