| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A1200 |
|---|
| Symbol | |
|---|
| ID | 4787046 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylibium petroleiphilum PM1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008825 |
|---|
| Strand | + |
|---|
| Start bp | 1295031 |
|---|
| End bp | 1295594 |
|---|
| Gene Length | 564 bp |
|---|
| Protein Length | 187 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 640089765 |
|---|
| Product | deoxycytidylate deaminase-like protein |
|---|
| Protein accession | YP_001020398 |
|---|
| Protein GI | 124266394 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG2131] Deoxycytidylate deaminase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCACAACA CCCCGCTGAT TGACTGGCAC TCGATGTTCA TGGGCGTCGC CATGCTCGCG
GCTGCTCGGT CCAAGGACGC GAGGAAGCGG AACGGAGCCT GCATCGCGAG CGCCGACAAC
AAGATTCTTG GCGTCGGCTA TAACGGGCTG CCCCGCGGGT GCGACGATGA CGACCCTTCG
TACTGGGCGG ACGTCGACGA CGATCCCGTT CAGTCTCGAC ATAGCTACAT CGTCCATGCT
GAAGTGAACG CAATACTCAA CTGCGTGGTT CTTCCGCTGA CGGGAAGTAC GATCTACACG
ACGCAGTTCC CCTGCCCGAG GTGCGTACAG TCGATCATTC AGGTGGGTAT CAAGCGGGTA
GTCTTCTTGG ACAAGAAGAC TCATCAAGTC GCACTCAACA GTGCCTCGGA CAAGATGCTC
GTAGACGCAG GCATCGAAGT CTTGTCCTTG GAAGAACTGG AGTCGACAGC AAGCCGATGG
TGCGAGAAGC TCGACGAGTT TGTTCGAACT ACAGGGCAGG AGATGCCTGT CGCGACTGCT
CCTCTGCCTC CGAGCGGGAT TTAG
|
|---|
| Protein sequence | MHNTPLIDWH SMFMGVAMLA AARSKDARKR NGACIASADN KILGVGYNGL PRGCDDDDPS
YWADVDDDPV QSRHSYIVHA EVNAILNCVV LPLTGSTIYT TQFPCPRCVQ SIIQVGIKRV
VFLDKKTHQV ALNSASDKML VDAGIEVLSL EELESTASRW CEKLDEFVRT TGQEMPVATA
PLPPSGI
|
|---|
| |