| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A1194 |
|---|
| Symbol | |
|---|
| ID | 4787040 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylibium petroleiphilum PM1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008825 |
|---|
| Strand | + |
|---|
| Start bp | 1291299 |
|---|
| End bp | 1292225 |
|---|
| Gene Length | 927 bp |
|---|
| Protein Length | 308 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640089759 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001020392 |
|---|
| Protein GI | 124266388 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG3440] Predicted restriction endonuclease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACTCGG ACGAACGTCA GTCGCTGATG CGCATCGCTG CGTTCGGCCA AGTCCGACGT
CTACTCGAGA CTCACGACCA ACTGACGGCC ACCGACCTGG GCGCCGGGTT CACCTTCGAG
GGCGAGCGTG TGCCGCTCGT GAACCCGCAA CGCGGCATCT TCAAGCCGCA GCAGATGCAG
CACCTGCTGT CGATCAAGAC GGTGTTCCCA AAAGCTGGCG CCAAGGTCTG GTACGACGAC
CAGAGGCACG TCCACCGCCA GATCTACGAG GGTGAAGAGA CGATCGACTA CGCGTTCATG
GGCACCGACC CCGACGTGGC CGAGAACCGC TGGCTGCGCG AGGCGATGGA GCAGCAGGTG
CCAATCATCT ACTTCCTCGG TGTGTCACCC GGGCGCTACC AGCCGGTCGT GCCGGCGTTC
ATCGTGGGTT GGGACGCGCA GGCATCCAAG GCGAAGGTGG CGTTCGGTGA CCCGTTGTCC
CTGGCTGCCA AGCCCCCGGG GGACCGTGCT GAACGTCGGT ACGCGCTGCG CATGGTGCAG
CAGCGCTTGC ATCAGGCCTC GTTCCGCGAC GCGGTTATCA CCGCCTATCG TGGGCGGTGT
GCGCTGTCAG GCTTGCCAGA GCCGCTGTTG CTGGATGCGG CTCACATCGT GGCTGACATG
GACGAGCGGC TTGGGCAGCC GATCGTCCCG AATGGCATTC CGCTCTCGAA GATCCATCAT
GCGGCCTTCG ACGCGCACCT TATTGGGGTC GACCCGGATT ATCGCGTGCA TGTTTCGGAG
CGGCTACTTG GGCAGAACGA CGGTCCCATG CTCGAGGCTT TGAAGCGACT TCACCGCGGC
GAGCTGCACT TGCCTTCCCG ATCCCAGGAC CGACCTGATC GCGAACGCTT GGCACGTCGG
TTTGAGCTTT TCAAGGCAGC GGCATAG
|
|---|
| Protein sequence | MDSDERQSLM RIAAFGQVRR LLETHDQLTA TDLGAGFTFE GERVPLVNPQ RGIFKPQQMQ
HLLSIKTVFP KAGAKVWYDD QRHVHRQIYE GEETIDYAFM GTDPDVAENR WLREAMEQQV
PIIYFLGVSP GRYQPVVPAF IVGWDAQASK AKVAFGDPLS LAAKPPGDRA ERRYALRMVQ
QRLHQASFRD AVITAYRGRC ALSGLPEPLL LDAAHIVADM DERLGQPIVP NGIPLSKIHH
AAFDAHLIGV DPDYRVHVSE RLLGQNDGPM LEALKRLHRG ELHLPSRSQD RPDRERLARR
FELFKAAA
|
|---|
| |