| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A1183 |
|---|
| Symbol | |
|---|
| ID | 4785582 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylibium petroleiphilum PM1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008825 |
|---|
| Strand | - |
|---|
| Start bp | 1269556 |
|---|
| End bp | 1271895 |
|---|
| Gene Length | 2340 bp |
|---|
| Protein Length | 779 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640089746 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001020379 |
|---|
| Protein GI | 124266375 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1479] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.00761899 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.154404 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGGCTCAGC CGTTTACCCA CAGCGCCGAA GCACTGCATG GCTTCTTTTC TCAGATGGGC
AGGGGCTTCT ACATCCCCTA CTACCAGCGG AACTACTCAT GGGATGACGA AAACGCGAAG
AAGCTCATCA CGGACATCTT CGCCGCCGTT CGCCGCACGC TCTCTAAGCC CACGCATGCG
CTGTTCCTCG GCACGGTCAT TCTTCATGAC GAAAAGAATC CGAAGCTGGG AACCCACTTC
GACACGCCGA ATCTGTTGAC CAAAGTTTCC AACGTGGTCG ACGGCCAGCA GCGCATCACG
TCCCTAGCCA TCCTCGCATG CGTGTTTGCT GAGTACGCGG GACGGTTGGC GAGCCAGCTG
ACCACGGTCG GCGGCGCCCA TGCCGAGTTC GCAAGCTTGG CGAACGAACT GACCGACGAG
GTCCGTCTGA TTCGCGAGTT CTTTTCCGTG GAGACGACCA AGGGGGGGGC CCAGCCGAGC
CGCAAGCCCA TCGTCATTCG CGCCGGTGAC GTGACCAGCA ACCCCGTCTC GGACCAATGG
ACGTTGGCCG GCGCCATCGA CGCGTTCTAT CGGTCCAACA CTTCATCGCT ACTGGCGAAT
GCGATCAATG GGGTCAAGCT GGCGGACTTG GCGCTGGATG ATCGTTTGAA GTCGGTCGTC
GAAGAGTTCA TCGATACCAT TGATTCGCAG CTTGAGACTG CGGACCAGGT GCTGGCCTCG
CGCCTACTTG TCGCGAACGA TATGGAAGGC AGCGCGCTTG AACGCTTCAC CGGATACCCC
CCGGACCTTA CGAAGATCGG AGCCTTGGGA GCACCAGAGC AGAAGTGCTT CTATTCGGCG
GTGCTGTTGC TCGCGGCTTC GATCTATCTG CGCAAAGGGT GTCATGTTGT CGTGATCGAA
TGCTTGGACG AGAGTCTGGC GTTCGACATG TTCCAGTCGC TCAATGCCAC CGGCACTCCG
CTAACCGCAT TTGAGGTGTT CAAGCCGGCC GTCGTGAAGG CCTGGGGAGC CAACTACTCA
ACGGGCATCA AGCCGCAGGT GGATCGCATC GAGCGCGTTT TCGATGAAGA GAGCACCGCT
GATCGGAAGG AGGACCTCAC CGATCGGGTG ATTGTGTCGA CCGCGTTGGT GTATGACGGG
ACCGAGCTGA GCAAGCGCTT CAGCGAAGAA CGGGACTGGT TGACGGCCAC GCTGCCAGCG
CCGCCGAGCG CCTTGGCTGC GACGTTCGTT CAGGCGTTAG CTGACCAAGC GGAGTATTTC
GATGTCGTCG TCAAGCCACG GCGATCCCCG AAGAACTCGA CCAACCTGGG CTTGGTGACG
CACCTCCAGC AGCTCGGCAT GCCGCTCGAC GATGCGGACC TGGCGGCCCT ATGCATCTAC
TTCGTTCGCG ATGCACAGCA TGCCATGGCG CACTCTGTCC TCAGCCTGTT CTACGCCAAG
CTTCTTCGGG CCAAGGGCGA CCCGGTGGCA TTGGCTGGCG CATCGGCAGA GTTTCTGTCA
GCCGCGAAGG CGGTCGCGGC GTTCTTCACC CTTTGGATGG GAGCGTCGCA AGGGCGATTC
CCTGATTCGG ACTACCGCAA GCTCTTCGAC CAGCATGCGC CGAACATGTC CCTGAAGGGA
GGCGCTGCCA ACCAGACAGC CGCCTACCTC AAGGGTGCCC TCCGCTTGGC CCTCGCTGGC
CAGGGGATCT ACGATGCGAC CAGCAGCATC GCAGCTCGCC CGCTCTGGGT GAACGCTGCG
AAGGGTTCGC CGTGGTATCA GCGAAAGACC GTATGCAAGT TCGGGTTGTT CGTCTCAGCG
CACGACGTTG GGGTCGATCT CGCCGCTGGA CGAGAGGGCT TCTACGTCGA TGGCAAGCCC
GGTTCGGTGC CAATGCTGAC CTCAAAGGCT TGGCACGCTT CAGCCTTCGA GGTGATCGAG
CACGTGGCGA CACGTGACCA GCCCAAGAAG TTGACGTTTC CTGCGATGTT CGATCCGGCG
ATCTACCCGG GCAACACGTC CATCGTCGAC AAGATTGGCA ACCTGACCCT ACTGTCAATG
CCGGTGAACT CGTCGGTGTA CTCGGAGTGG CCGGACAAGG CCTTCTACTA CTGGCACCTG
ACCACGCCAA CCAGTACCGC CGCAGGCCCG AGTTCCGGTG CCCTCATGGC GAGCCTGGGG
ATCGCTTCGC TACCACCGAG CCTCAGCACG CTGAGTGCAG GGACTCAACA CGTGCCGCAC
TTGGCGCCGT TGGCCCTGCG CGGAACTGTC GGCGCGAAGT GGGATGCGTC GTTCATCGAG
CAGCGGTCTC AGCACCTGTG TGAGCGCATC TTTGACAAGC TCGACGGCTG GCTGCGCTAG
|
|---|
| Protein sequence | MAQPFTHSAE ALHGFFSQMG RGFYIPYYQR NYSWDDENAK KLITDIFAAV RRTLSKPTHA
LFLGTVILHD EKNPKLGTHF DTPNLLTKVS NVVDGQQRIT SLAILACVFA EYAGRLASQL
TTVGGAHAEF ASLANELTDE VRLIREFFSV ETTKGGAQPS RKPIVIRAGD VTSNPVSDQW
TLAGAIDAFY RSNTSSLLAN AINGVKLADL ALDDRLKSVV EEFIDTIDSQ LETADQVLAS
RLLVANDMEG SALERFTGYP PDLTKIGALG APEQKCFYSA VLLLAASIYL RKGCHVVVIE
CLDESLAFDM FQSLNATGTP LTAFEVFKPA VVKAWGANYS TGIKPQVDRI ERVFDEESTA
DRKEDLTDRV IVSTALVYDG TELSKRFSEE RDWLTATLPA PPSALAATFV QALADQAEYF
DVVVKPRRSP KNSTNLGLVT HLQQLGMPLD DADLAALCIY FVRDAQHAMA HSVLSLFYAK
LLRAKGDPVA LAGASAEFLS AAKAVAAFFT LWMGASQGRF PDSDYRKLFD QHAPNMSLKG
GAANQTAAYL KGALRLALAG QGIYDATSSI AARPLWVNAA KGSPWYQRKT VCKFGLFVSA
HDVGVDLAAG REGFYVDGKP GSVPMLTSKA WHASAFEVIE HVATRDQPKK LTFPAMFDPA
IYPGNTSIVD KIGNLTLLSM PVNSSVYSEW PDKAFYYWHL TTPTSTAAGP SSGALMASLG
IASLPPSLST LSAGTQHVPH LAPLALRGTV GAKWDASFIE QRSQHLCERI FDKLDGWLR
|
|---|
| |