| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A1171 |
|---|
| Symbol | |
|---|
| ID | 4785570 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylibium petroleiphilum PM1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008825 |
|---|
| Strand | + |
|---|
| Start bp | 1257589 |
|---|
| End bp | 1258221 |
|---|
| Gene Length | 633 bp |
|---|
| Protein Length | 210 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640089734 |
|---|
| Product | formate dehydrogenase iron-sulfur subunit |
|---|
| Protein accession | YP_001020367 |
|---|
| Protein GI | 124266363 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0437] Fe-S-cluster-containing hydrogenase components 1 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.206202 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.721905 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAGAA TGAAGTTCAT CTGCGACGCC GAGCGCTGCA TCGAATGCAA CGGCTGCGTC
ACCGCCTGCA AGGCCGAGCA CGAGGTGCCC TGGGGTGTGA ACCGACGCCG CGTGGTGACG
CTCAACGACG GTGTGCCGGG CGAGCGCAGC ATCTCGGTGG CCTGCATGCA CTGCTCCGAC
GCACCCTGCA TGGCGGTGTG CCCGGTCGAC TGCTTCTACC GCACCGACGA GGGCGTGGTG
CTGCACGACA AGGACATCTG CATCGGCTGC GGCTACTGCA GCTATGCCTG CCCGTTCGGC
GCGCCGCAGT TCCCGACCAA CGGCACGTTC GGGCTACGCG GCAAGATGGA CAAGTGCACC
TTCTGCGCCG GGGGCCCGGA GGCCAATGGC TCCGAAGCCG AGTTCGAGAA GTACGGCCAC
AACCGCCTCG CCGAGGGCAA GCTGCCGGCC TGCGCCGAGA TGTGCTCGAC CAAGGCCCTG
CTCGGCGGCG ACGGCGACGT GGTCGCCGAC ATCTTCCGCA CCCGCGTGCT GACGCGTGGC
AAGGGCTCCG AGGTGTGGGG CTGGGGCACG GCCTACGGCA AGCCGACCGG TGGCGCGGCG
CAGCCGGCCG CGGCCGAAGG CGGCAAGTCA TGA
|
|---|
| Protein sequence | MARMKFICDA ERCIECNGCV TACKAEHEVP WGVNRRRVVT LNDGVPGERS ISVACMHCSD
APCMAVCPVD CFYRTDEGVV LHDKDICIGC GYCSYACPFG APQFPTNGTF GLRGKMDKCT
FCAGGPEANG SEAEFEKYGH NRLAEGKLPA CAEMCSTKAL LGGDGDVVAD IFRTRVLTRG
KGSEVWGWGT AYGKPTGGAA QPAAAEGGKS
|
|---|
| |