| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A1170 |
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| Symbol | |
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| ID | 4785569 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008825 |
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| Strand | + |
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| Start bp | 1254608 |
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| End bp | 1257574 |
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| Gene Length | 2967 bp |
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| Protein Length | 988 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640089733 |
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| Product | formate dehydrogenase large subunit precursor |
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| Protein accession | YP_001020366 |
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| Protein GI | 124266362 |
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| COG category | [C] Energy production and conversion
[R] General function prediction only |
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| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing
[COG3383] Uncharacterized anaerobic dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.970148 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGCTCA CGCGCAAGTC GCCTGATGCG GGCTCCGGCT CGCCTGCATC GTCGCTGGTC
TCGAGCCTCT CGCGCGGCCT CTCGCGCGCC ATCCCGACGA TGGACCGTCG GTCCTTCCTG
CGCCGCTCCG GCCTGGGCGT GGGGGCCGGT CTCGCCGCCG GGCAGCTGAC GTTGGTGCGC
AAGGCGCAGG CCTCGGATGC GTCCAAGGCC GAGGCGGGCC CGGGCAAGGT GGAGGTCAGG
CGCACGGTGT GCGGTCACTG CTCGGTGGGC TGCGCGGTCG ACGCGGTGGT GCACAACGGC
GTGTGGGTGC GCCAGGAGCC GGTGTTCGAC TCGCCGATCA ACCTGGGCGC GCACTGCGCC
AAGGGCGCTG CGCTGCGCGA GCACGGCCGC GGCGAATACC GCCTGCGCTA CCCGATGAAG
CTGGTGAACG GCAAGTACGA GCGCATCAGC TGGGACACCG CACTCGACGA GATCAGCGCG
CGCATGCTCG AGCTGCGCAA GCAGAGCGGC CCGGACTCGG TGTTCGTGGT CGGGTCGAGC
AAGCACAACA ACGAGCAGGC CTACCTGCTG CGCAAGTGGA TGAGCCTGTG GGGCAGCAAC
AACTGCGATC ACCAGGCACG CATCTGCCAC AGCACCACGG TCGCGGGCGT CGCGAACACC
TGGGGCTACG GCGCGATGAC CAACTCCTAC AACGACATGC AGAACGCCCG CATGGCGCTC
TACATCGGCT CCAACGCCGC CGAGGCGCAC CCGGTGTCGA TGCTGCACAT GCTGCATGCC
AAGGAGACCG GCTGCAAGAT GATCGTCGTG GACCCGCGCT TCACGCGCAC CGCGGCGCGT
GCCGACGAAC ACGTGCGCAT CCGTTCGGGC TCGGACATCC CCTTCCTGTT CGGCGTGCTG
CACCACATCT TCAAGAACGG CTGGGAAGAC AAGCAGTACA TCAACGACCG CGTCTACGGC
ATGGACAAGG TGCGCGAGGA CGTGCTCGCG AACTGGACGC CGGACAAGGT GCAGGAGGCC
TGTGGCGTCG ACGAGGCCAC CGTGTTCCGC GTGGCCAAGA CCATGGCCGA CAACCGCCCC
GGCACCATCG TCTGGTGCAT GGGCCAGACC CAGCACACCA TCGGCAACGC GATGGTGCGC
GCCTCGTGCA TTCTGCAGCT CGCGCTCGGC AACATCGGCA AGAGCGGCGG CGGCGCCAAC
ATCTTCCGTG GCCACGACAA CGTGCAGGGC GCCACGGACG TGGGCCCCAA CCCCGATTCG
CTGCCTGGCT ACTACGGCCT GGCCGAGGGC TCGTTCAAGC ATTTCGCCAA GACCTGGGGC
GTGGACTTCG AGTGGATCAA GAAGCAGTAC GCGCCGGGCA TGATGACCAA ACCCGGCATG
ACGGTGTCGC GCTGGGTCGA CGGCGTGCTC GAAAAGAACG AGCTGATCGA CCAGGACAGC
AACCTGCGCG GCCTGTTCTT CTGGGGCCAT GCGCCGAACT CGCAGACGCG CGGCCTGGAA
ATGAAGAAGG CGATGGACAA GCTCGACCTG CTGGTGGTCG TCGATCCCTT CCCGTCGGCC
ACCGCGGCGA TGGCGGCGAT GCCCGGCAAG CCCGAGGACC AGAACCCCAA CCGCGCCGTC
TACCTGCTGC CGGCGACGAC GCAGTTCGAG ACCAGTGGCT CGTGCACCGC GTCGAACCGC
TCGATCCAGT GGCGCGAGCA GGTCATCGAG CCGCTGTGGG AGAGCCGCAA CGACCACATG
ATCATGTACC AGCTCGCGCA GAAGCTGGGC TTCGACAAGG AGCTGACGAA GAACTACAAG
CTGGTCGCCG GCAAGGGCGG CATGATGGAG CCCGAGCCCG AATCGATCCT GCGCGAGATC
AACAAGAGCG TCTGGACCAT CGGCTACACC GGCCAGAGCC CCGAGCGCCT GAAGGTGCAC
ATGCGCAACA TGCACGTCTT TGACGTGAAG ACGCTGCGCG CCAAGGGCGG CACCGACAAG
GAGACCGGGT ACTCCCTCGA CGGCGATTAC TTCGGCCTGC CTTGGCCGTG CTACGGCACG
CCGGAAATGA AGCACCCGGG CTCGCCCAAC CTCTACGACA CCTCCAAGCA CGTGATGGAC
GGCGGCGGCA ACTTCCGCGC CAACTTCGGT GTCGAGAAGG ACGGCGTCAA CCTGCTGGCC
GAGGATGGCT CGTTCTCCAA GGGTGCGGAC CTCACCACCG GCTATCCGGA GTTCGACCAC
GTGCTGCTGA AGAAGCTCGG CTGGTGGGAC GAACTGAGCG AGCCCGAGAA GGCCGCGGCC
GAGGGCAAGA ACTGGAAGAC CGATTCGTCG GGCGGGATCA TCCGCGTCGC GATGAAGAAC
CACGGCTGCC ATCCGTTCGG CAACGCGAAG GCGCGGGCCG TGGTGTGGAA CTTCCCCGAT
GCGATCCCGA AGCACCGCGA GCCGCTGTAC TCGACGCGTC CGGACCTGGT GGCCAAGTAC
CCGACGCACG ACGACAAGAA GGCGTTCTGG CGCCTGCCCA CCTTGTTCAA GACCGTGCAG
GACAAGAACA AGGACATCGG CAAGGACTTC CCGCTGATCA TGAGCAGCGG GCGGCTGGTG
GAGTACGAGG GCGGCGGCGA GGAGACCCGC TCCAACCCCT ACCTGGCCGA GCTGCAGCAG
GAGATGTTCG TCGAGATCAA CCCAGCCACC GCCAACGACC GCGGCATCCG CAACGGCGAG
ACGGTCTGGG TCCGCACGCC GACCGGCGCG CGCCTCACGG TCAAGGCGCT GGTCACCGAG
CGAGTGGACC GCGAGACGGT GTGGCTGCCC TTCCACTTCT CGGGCCGCTG GCAGGGCGTC
GATCTCGCGC CCTACTACCC GCAGGGGGCG ATGCCGGTCA TCCGCGGCGA GGCGATCAAC
ACCGCCACCA CCTACGGCTA CGACAGCGTC ACGATGATGC AGGAGACCAA GACCACGGTC
TGCCAGGTCG AGCGCGCCTC TGTGTGA
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| Protein sequence | MLLTRKSPDA GSGSPASSLV SSLSRGLSRA IPTMDRRSFL RRSGLGVGAG LAAGQLTLVR
KAQASDASKA EAGPGKVEVR RTVCGHCSVG CAVDAVVHNG VWVRQEPVFD SPINLGAHCA
KGAALREHGR GEYRLRYPMK LVNGKYERIS WDTALDEISA RMLELRKQSG PDSVFVVGSS
KHNNEQAYLL RKWMSLWGSN NCDHQARICH STTVAGVANT WGYGAMTNSY NDMQNARMAL
YIGSNAAEAH PVSMLHMLHA KETGCKMIVV DPRFTRTAAR ADEHVRIRSG SDIPFLFGVL
HHIFKNGWED KQYINDRVYG MDKVREDVLA NWTPDKVQEA CGVDEATVFR VAKTMADNRP
GTIVWCMGQT QHTIGNAMVR ASCILQLALG NIGKSGGGAN IFRGHDNVQG ATDVGPNPDS
LPGYYGLAEG SFKHFAKTWG VDFEWIKKQY APGMMTKPGM TVSRWVDGVL EKNELIDQDS
NLRGLFFWGH APNSQTRGLE MKKAMDKLDL LVVVDPFPSA TAAMAAMPGK PEDQNPNRAV
YLLPATTQFE TSGSCTASNR SIQWREQVIE PLWESRNDHM IMYQLAQKLG FDKELTKNYK
LVAGKGGMME PEPESILREI NKSVWTIGYT GQSPERLKVH MRNMHVFDVK TLRAKGGTDK
ETGYSLDGDY FGLPWPCYGT PEMKHPGSPN LYDTSKHVMD GGGNFRANFG VEKDGVNLLA
EDGSFSKGAD LTTGYPEFDH VLLKKLGWWD ELSEPEKAAA EGKNWKTDSS GGIIRVAMKN
HGCHPFGNAK ARAVVWNFPD AIPKHREPLY STRPDLVAKY PTHDDKKAFW RLPTLFKTVQ
DKNKDIGKDF PLIMSSGRLV EYEGGGEETR SNPYLAELQQ EMFVEINPAT ANDRGIRNGE
TVWVRTPTGA RLTVKALVTE RVDRETVWLP FHFSGRWQGV DLAPYYPQGA MPVIRGEAIN
TATTYGYDSV TMMQETKTTV CQVERASV
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