| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A1169 |
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| Symbol | |
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| ID | 4785568 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008825 |
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| Strand | - |
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| Start bp | 1252577 |
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| End bp | 1253959 |
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| Gene Length | 1383 bp |
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| Protein Length | 460 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640089732 |
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| Product | sigma-54 dependent response regulator |
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| Protein accession | YP_001020365 |
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| Protein GI | 124266361 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.247521 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.480533 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGCCA GCCCCGCCCT GCCCGCTCCC GCCCCCGGAC TCGACGCCTG GCCGCGCGCC
TCGGTGCTGC TGGTCGACGA CGAGCAGGGC ATGCGCAACT TCCTCGAGAA GACGCTGGCA
CCGCGCTGCG GCAACGTGCA GAGCGCTGCC AGCGCCGAGG AGGCCGACGC GCTGGTGCGC
CGGCACCGTT TCGACCTGGT GATCCTCGAC ATCTCGCTGC CCGGGAAGAG CGGCCTCGCC
TGGCTTCGCG AGCTGCGCGA GCAGGGCTAC AGCGGCGAGG TGGTGCTGAT CACCGCCTAT
GCCGATCTCG ACACCGCGAT CGAGGCGCTG CGCGCGGGCG CCTCCGACCT GGTTCTCAAG
CCGTTTCGCG TGACGCAGAT CCTCAACGCG GTGAAGCACG GCCTCGACCG CACGCTGCTG
AAGCGCGAGA ACTGGGTGCT CAAGCACATG ATCTCGCAGC GCGGCGAGGG CTTCGACGGC
CTGGTGGGCA GCTCGCCGGC GATGCAGGAC CTCAGGCGCG CGCTGCAGCG CGCCGCGCCG
GTGGCCAGCA CCGTGCTGCT GTCGGGCGAA TCGGGCACCG GCAAGGAGCT GGCGGCGATC
GCGCTGCATC GCCACAGCCC GCGCGCACCG GAACCCTTCG TGCCGGTCAA CTGCGCGAGC
CTCGCGCCCG AGCGCATCGA GAGCGAGCTG TTCGGCCATG CCCAGGGTGC CTTCACCGGC
GCGACGCACG GCCGCGACGG GCTGTTCTAT TACGCCCAGG GCGGCACGCT GTTCCTCGAC
GAGATCGCCG AACTGCCGCT GGCCCAGCAG GCTGCACTGC TGCGCGTGCT GGAGGACCAC
CGCATCCGTC CGGTCGGCAG CGAGCAGCAG ATCCCGGTCG ACGTGCGCAT CGTCGCCGCC
ACCAACCGGC GGCTGGCCGA CGAGGTGGCC GCCGGGCGCT TCCGCAAGGA CCTGTACTAC
CGGCTGCAGG TGGTCGAGAT CGGCCTGCCG CCGCTGCGCG AGCACAAGGA CGACATCGCC
GAGCTGGTGG CGCATTTCAT CGCCACGCTG GCGCCGCATC TCGGCGTCGA GCCGATCGCC
GTCAGCCCGG CCGAGATGGC CTACCTGCAG CAGTACGACT GGCCCGGCAA CGTGCGCGAG
CTGCGCAACC TGGTGGAGCG CTCGATGATC CTGGGCGCGC TCAACGTGTC AGCGCTCTAC
CCCGGCGGTA CTACGTCGCG CACCGGCGCG AGCGCCGGCC CGACCGACCT GCAGACGCTG
GAGAAGCAGC ACATCCTCGC GGTGCTGGAA TCGGTGCAGG GCGACAAGAC GCGCGCGGCT
GAGTTGCTGG GCATCTCGCG CCGCACGCTG GAGCGGCGCT GCGCCGAATG GCTAGTCGCT
TGA
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| Protein sequence | MPASPALPAP APGLDAWPRA SVLLVDDEQG MRNFLEKTLA PRCGNVQSAA SAEEADALVR
RHRFDLVILD ISLPGKSGLA WLRELREQGY SGEVVLITAY ADLDTAIEAL RAGASDLVLK
PFRVTQILNA VKHGLDRTLL KRENWVLKHM ISQRGEGFDG LVGSSPAMQD LRRALQRAAP
VASTVLLSGE SGTGKELAAI ALHRHSPRAP EPFVPVNCAS LAPERIESEL FGHAQGAFTG
ATHGRDGLFY YAQGGTLFLD EIAELPLAQQ AALLRVLEDH RIRPVGSEQQ IPVDVRIVAA
TNRRLADEVA AGRFRKDLYY RLQVVEIGLP PLREHKDDIA ELVAHFIATL APHLGVEPIA
VSPAEMAYLQ QYDWPGNVRE LRNLVERSMI LGALNVSALY PGGTTSRTGA SAGPTDLQTL
EKQHILAVLE SVQGDKTRAA ELLGISRRTL ERRCAEWLVA
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