Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpe_A1168 |
Symbol | |
ID | 4785567 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylibium petroleiphilum PM1 |
Kingdom | Bacteria |
Replicon accession | NC_008825 |
Strand | - |
Start bp | 1250384 |
End bp | 1252441 |
Gene Length | 2058 bp |
Protein Length | 685 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640089731 |
Product | sensor histidine kinase |
Protein accession | YP_001020364 |
Protein GI | 124266360 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.527437 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGTTCT ACGAGCGCTT CCAGCGGCTG CCGATCCGCA GCAAGCTGCT GGCGATGGTG CTGCTGCCGT TGGTGGTGGT GCTGCCGCTG CTGGGCCTGC TGCTGCTGGT CTGGGGCAAC GTGGCGCTGG ACCGCCTGCT GATCACCAAG GTGCGCAGCG ACCTGGCGGT GGCCCAGGGC TACTTCGAGC GCGTGCTCGG CGAGGTGGGC AGCAGCGCCG CCGCCGTGGC CGACTCGCAG GCACTGCACC GTGCGCTGGA CGACGACACG GCGGCGACGT CGGCCGACGC GGGGACGTGG GTGACGCTGC TGCAGGCGTT CAAGGCCCGC GAAGGCCTCG ATTTCATCAA CTTGCGCGCC CCCGACGGGA CGTTGCGCAT CACCGACTTC GGCGCGGCCC CGGCCACCGA CGGGCGCTCG CCGGCGTTCC GTGCGGCGGC GGCCGAAAGC GGCCGGGCAC GCGCCAGCAT CGAGGTGCTG CAGCCCGACG AACTGGCGCG TCTCGCGCCG GCGCTGCAGG ACCGCGTCGC GGTGCCGCTG GTGAGCACGC GCAACGCCGC GCCCACGGCT CGCACGCAGG AAGACCGCGC GATGGTCGTG CTGGCCACCG CGCCGGTGCA CGACGAACGC GGCGTGCTGC GCGGCCACGT GCAGGCCGGC GTGCTGCTGA ACCGCAACCT GCCCTTCATC GACCACATCA ACGAGATCGT CTACCCCGAA GGCGCGCTGC CCTTCGGCAG CCGCGGCACC GCGACGCTGT TCCTCGACGA CGTGCGCATC AGCACCAACG TGCGGCTGTT CGGCGACGAT CCCAAGAACC GCGCCATCGG CACCCGCGTG TCGCAGGCGG TACGCGACAC CGTGCTCGGC GGCGGTCAGC CGTGGCTGGA CCGCGCCTTC GTCGTCAACG ACTGGTACGT CTCGGGCTAC CTGCCGCTGG CCGACGGCGC CGGCCGGCGC GTCGGCATGC TCTACGTCGG CTACCTGGAA CGGCCCTTCA CCTGGCTGAA GTACGCCGTG CTGCTGAGCA TCGGCGCGAT CTTCTTCGCC GTGATGATCG GCGCCACCGT GGTGTCGCTG CGCTGGGCGC GCAGCATCTT CAAGCCGCTG GAGCAGATGG CGCGCACGAT GCAGCAGGTC GAGGCCGGTG GGCTCGACGC GCGCGTCGGC GCGGCCGGCC ACCACCCCGA CGAGATCGGC CGGCTCGCCG CCCACCTGGA CCACCTGCTC GACGTGATCG ACGACAAGAC GCGCGCGCTG CAGCGCTGGG GCGACGAGCT CGACCGCAAG GTGGTCGAGC GCACGCGCGA CCTGGAGCAG GCGCAGGCGC AGCTGCTGCG CTCGGAGAAG CTGGCCACCG TGGGCCAGCT CACCGCCAGC ATCGCGCACG AGGTCAACAA CCCGATCGCG GTGATCCAGG GCAACCTCGA CCTGCTCCGC GAGCTGCTCG GGCCGCAGAC CGCCGCCAAG GTCGACGCCG AGCTGCGGCT GGTGGACGAG CAGATCGAGC GCATGCGGCT GATCGTCACG CAACTTCTGC AGTTCGCGCG CCCGAACGAA TACGCCGGCT ACGTGGACAG CGTGAGCGTG GCGCGCGCGC TCGACGACTC GCTGCTGCTG GTCGGGCCTC AGCTCGCGCG CACCCGGATC GCGGTGCAGC GCGACGACCG GGCGACGGCC AGTGCCGCCA TCAACCGCCA GGAGCTGCAG CAGGTGCTGC TCAACCTGCT GATCAACGCG CTGCACGCGA TGCCCGACAG CGGCACGCTG TCGCTGCACA CACGCGACTG GCACGCCGCC GACGGCCGCG TGCAGGGCGT GCAGATCGAC GTGGCCGACA GCGGCCCCGG GCTGGGACCG GAGATCGAGT CGCGGCTGTT TCAGCCCTTC GTCACCACCA AGACCGACGG CACCGGCCTG GGCCTGTGGA TCAGCCGCAG CCTGATCGAG CGCTACGGCG GCACGCTGAC CGCGGCCAAC CGCGACGACG GCGCGCGCGG CGCGGTGTTC AGCGTGCGGC TCTACAGCGA ACTGCCGGAG ACGACGCTGC CGGCCTGA
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Protein sequence | MTFYERFQRL PIRSKLLAMV LLPLVVVLPL LGLLLLVWGN VALDRLLITK VRSDLAVAQG YFERVLGEVG SSAAAVADSQ ALHRALDDDT AATSADAGTW VTLLQAFKAR EGLDFINLRA PDGTLRITDF GAAPATDGRS PAFRAAAAES GRARASIEVL QPDELARLAP ALQDRVAVPL VSTRNAAPTA RTQEDRAMVV LATAPVHDER GVLRGHVQAG VLLNRNLPFI DHINEIVYPE GALPFGSRGT ATLFLDDVRI STNVRLFGDD PKNRAIGTRV SQAVRDTVLG GGQPWLDRAF VVNDWYVSGY LPLADGAGRR VGMLYVGYLE RPFTWLKYAV LLSIGAIFFA VMIGATVVSL RWARSIFKPL EQMARTMQQV EAGGLDARVG AAGHHPDEIG RLAAHLDHLL DVIDDKTRAL QRWGDELDRK VVERTRDLEQ AQAQLLRSEK LATVGQLTAS IAHEVNNPIA VIQGNLDLLR ELLGPQTAAK VDAELRLVDE QIERMRLIVT QLLQFARPNE YAGYVDSVSV ARALDDSLLL VGPQLARTRI AVQRDDRATA SAAINRQELQ QVLLNLLINA LHAMPDSGTL SLHTRDWHAA DGRVQGVQID VADSGPGLGP EIESRLFQPF VTTKTDGTGL GLWISRSLIE RYGGTLTAAN RDDGARGAVF SVRLYSELPE TTLPA
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