Gene Mpe_A1138 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpe_A1138 
Symbol 
ID4785713 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylibium petroleiphilum PM1 
KingdomBacteria 
Replicon accessionNC_008825 
Strand
Start bp1215967 
End bp1216533 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content66% 
IMG OID640089701 
Producthypothetical protein 
Protein accessionYP_001020334 
Protein GI124266330 
COG category[S] Function unknown 
COG ID[COG3212] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0517301 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCTGT CCCGAACAAG CCGTCTCCGA GCACTGCGAG GCGCTCTTCC CGTCGCCGTC 
GCCACCTCCG TTCTCACGCT CTGGAGCGCC GCAGCTGCAG CGGCACCCAA GATCCCCAAG
GTCAGCGTCG GCATCGAGAA ATGCATCCCG ACGGTGCTGG CCAAGCACCC CGGCACCGTG
CTGCAGGTGG TGCTGAAGCC GGAGGACGGC AAGCCGGTCT GGGAGATCGA GGTCGACGGC
AAGGACGGCA AGCTGTGGGA CGTGGAGTGC AGCGGCGCCA CCGGCAAGAT CGTCGAGAGC
GAGCAGCGCT TCAAGTCGGC CGACGAGCCC GGCTTCAAGG AGAAGGTCAA GGTCAGCGAG
ACCGACGCGA CCAAGACCGC ACTTGCCAAG CACCCGGGCA AGGTCGAGCG CGTCGAGTAC
GAGGTCGAGT CCGATGGCAC GCCGGTCTAC GAGTTCGACA TCGAGCAGGA CAATGGGGAC
GACGTGCGCG TCGAGGTCGA CGCGGTCACC GGCAAACTGC GCGAGGCACA CCCCGAATTG
CTGGAGATCG GCCGACTGCC GAAGTGA
 
Protein sequence
MTLSRTSRLR ALRGALPVAV ATSVLTLWSA AAAAAPKIPK VSVGIEKCIP TVLAKHPGTV 
LQVVLKPEDG KPVWEIEVDG KDGKLWDVEC SGATGKIVES EQRFKSADEP GFKEKVKVSE
TDATKTALAK HPGKVERVEY EVESDGTPVY EFDIEQDNGD DVRVEVDAVT GKLREAHPEL
LEIGRLPK