| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A1135 |
|---|
| Symbol | |
|---|
| ID | 4785710 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylibium petroleiphilum PM1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008825 |
|---|
| Strand | - |
|---|
| Start bp | 1210974 |
|---|
| End bp | 1211840 |
|---|
| Gene Length | 867 bp |
|---|
| Protein Length | 288 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640089698 |
|---|
| Product | UDP-glucose pyrophosphorylase |
|---|
| Protein accession | YP_001020331 |
|---|
| Protein GI | 124266327 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1210] UDP-glucose pyrophosphorylase |
|---|
| TIGRFAM ID | [TIGR01099] UTP-glucose-1-phosphate uridylyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.00581514 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGCTCATCA ACAAGGCGAT CTTCCCCGTG GCGGGTCTCG GCACCCGCTT TCTGCCGGCC
ACCAAGGCAC AGCCCAAGGA AATGCTGCCG GTCGTTGACA AGCCCTTGAT CCAGTATGCC
GTCGAGGAAG CGTACGCCGC CGGCATCCGC GAGATGATTT TTGTGACCGG ACGCAGCAAG
CGCCCGATCG AGGACCACTT CGACATGGCC TACGAACTCG AGGTGGAACT CGAGGCCGCC
GGCAAGGCCG AACTGCTGGA GCTGGTGCGC CAAGTCAAGC CCGACGACAT GGAGTGCGTC
TACGTGCGCC AGTCCAAGAT GCTGGGCCTG GGTCACGCGG TGCTGTGCGC CGAGCGGCTG
GTGCGCAACG AGCCGTTCGC CGTGCTGCTT GCCGATGACC TGATGGTCGG CGACAAGCCC
ATCCTGACCC AGATGGTCGA GCAGTTCGAC GAATGGCGCG CCTCGATCCT CGCGGTCCAG
GAAGTACCGG AGGACCAGAC CCGCCGCTAC GGCATCGTGG CGGGCACGCC GGTCAACGAC
CGCATGATGG ATGTTTCGCG CATCGTCGAG AAGCCGGCTC CGGCCGACGC CCCGTCGCGG
CTGGGCGTGG CCGGGCGCTA CATCCTGATG CCCGACGTCT TCACCGAGAT CCGCAACCAG
CCGCGCGGCG TGGGGGGTGA GATCCAGCTG ACCGACGGCA TTGCCGGCCT GTTGCGCCGC
CAGAAGGTGT TCGCCTACAC CTACGAGGGC AAGCGCTACG ACTGCGGCAG CAAGGAAGGC
TTCCTGCAGG CCAACATCGA GCTCGGCATG GCCCACCCGC AGATCGGCGC CAGCGTGCGC
GAGTACCTGA AGACGCTGGC GCTCTGA
|
|---|
| Protein sequence | MLINKAIFPV AGLGTRFLPA TKAQPKEMLP VVDKPLIQYA VEEAYAAGIR EMIFVTGRSK
RPIEDHFDMA YELEVELEAA GKAELLELVR QVKPDDMECV YVRQSKMLGL GHAVLCAERL
VRNEPFAVLL ADDLMVGDKP ILTQMVEQFD EWRASILAVQ EVPEDQTRRY GIVAGTPVND
RMMDVSRIVE KPAPADAPSR LGVAGRYILM PDVFTEIRNQ PRGVGGEIQL TDGIAGLLRR
QKVFAYTYEG KRYDCGSKEG FLQANIELGM AHPQIGASVR EYLKTLAL
|
|---|
| |