Gene Mpe_A1126 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpe_A1126 
Symbol 
ID4784608 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylibium petroleiphilum PM1 
KingdomBacteria 
Replicon accessionNC_008825 
Strand
Start bp1203990 
End bp1204703 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content65% 
IMG OID640089689 
Productputative amino acid ATP-binding ABC transporter protein 
Protein accessionYP_001020322 
Protein GI124266318 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0410] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.577077 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0994747 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGACA CTTTGCTCAA GGTCAGCGGA CTCAAGGTCG CTTATGGCGG CATCCAGGCG 
GTGAAGGGCG TTTCGCTCGA GGTCAGGCAG GGTGAACTGG TGAGCCTGAT CGGCGCCAAT
GGCGCCGGCA AGACCACCAC GCTGAAGGCG ATCACCGGCC TGCAGCCGGT GGGCAGCGGC
GAGATCGAGT TCATGGGCCG CAACATCAAG GGCCAGGGTG CCTGGGACCT GGTGAAGCAG
GGCCTGGTGA TGGTGCCCGA GGGGCGCGGC ACCTTCACCC GCATGACGAT CACCGAGAAC
CTGCAGATGG GGGCGTTCAC GCGCACCGAC AAGGAGATCG ACGCCGACCT CGAGAAGGTG
TTCGGGATCT TTCCCCGCTT GCGCGAGCGC CGCAACCAAT TGGCCGGCAC GATGAGCGGC
GGCGAGCAGC AGATGCTGGC GATGGGCCGC GCGCTGATGG CGCGCCCGAA GGTGCTGCTG
ATGGACGAGC CCTCGATGGG CCTGTCGCCG ATCATGGTCG ACAAGATCTT CGAGGTAGTC
AACGATATTC ACCAGCAAGG CACGACCGTG CTGCTGGTCG AGCAGAACGC CAGTCGGGCG
CTGCAGCTCG CGACGCGTGG CTATGTGATG GAGTCGGGCG AGGTCACGAT GAGCGGCGAG
GCGAGCGCAC TGCTCAACGA CCCGAAGGTG AGGGCGGCCT ACCTCGGGGA GTGA
 
Protein sequence
MADTLLKVSG LKVAYGGIQA VKGVSLEVRQ GELVSLIGAN GAGKTTTLKA ITGLQPVGSG 
EIEFMGRNIK GQGAWDLVKQ GLVMVPEGRG TFTRMTITEN LQMGAFTRTD KEIDADLEKV
FGIFPRLRER RNQLAGTMSG GEQQMLAMGR ALMARPKVLL MDEPSMGLSP IMVDKIFEVV
NDIHQQGTTV LLVEQNASRA LQLATRGYVM ESGEVTMSGE ASALLNDPKV RAAYLGE