| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A1125 |
|---|
| Symbol | |
|---|
| ID | 4784607 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylibium petroleiphilum PM1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008825 |
|---|
| Strand | + |
|---|
| Start bp | 1203199 |
|---|
| End bp | 1203975 |
|---|
| Gene Length | 777 bp |
|---|
| Protein Length | 258 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640089688 |
|---|
| Product | putative ABC transporter ATP-binding protein |
|---|
| Protein accession | YP_001020321 |
|---|
| Protein GI | 124266317 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.334087 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.177035 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGAACA CCGTTCTCCG CGTAGCCAAC GTGTCCAAGC GCTTCGGCGG CCTGCAGGCC
CTGAGCGACG TGGGCATCAC CATCGACCGC GGCCAGGTCT ATGGCCTGAT CGGCCCCAAC
GGCGCCGGCA AGACCACCTT CTTCAACGTC ATCACCGGCC TGTACACGCC GGACTCCGGC
GTGTTCGAAC TCGAGGGCAA GGCTTACAAG CCAAGCGCGG TGCACGAGGT CGCCAAGGCC
GGCATCGCAC GCACCTTCCA GAACATCCGG TTGTTCGCCG ACATGACCGC GCTTGAGAAC
GTGATGGTCG GGCGCCACAT CCGCACCAGG TCGGGGCTGA TCGGCGCGGT GTTGCGCACG
CCGGGCTTCA AGCACGAAGA AGCGGCCATC GCGAAGCGCG CCCAGGAACT GCTCGACTAC
GTGGGCATCG GCAAGTACGC CGAGTTCAAG GCGCGCACGC TGAGCTACGG GGACCAGCGT
CGGCTGGAGA TCGCCCGCGC GCTGGCCACC GAACCCAAGC TCATCGCGCT CGACGAGCCG
GCCGCGGGAA TGAACGCGAC GGAGAAGGTG GTGCTGCGCG AGCTGATCGA CCGCATCCGC
AAGGACGGCC GCACCATCCT GCTGATCGAG CATGACGTGA AGCTGGTGAT GGGGCTGTGC
GATCGCGTGA CGGTGCTCGA TTACGGCAAG CAGATCGCCG AAGGCGCGCC GGCCGACGTG
CAGCGCAACG AGAAGGTGAT CGAGGCCTAT CTGGGCGCCG GTCACAAGAC CCATTGA
|
|---|
| Protein sequence | MTNTVLRVAN VSKRFGGLQA LSDVGITIDR GQVYGLIGPN GAGKTTFFNV ITGLYTPDSG
VFELEGKAYK PSAVHEVAKA GIARTFQNIR LFADMTALEN VMVGRHIRTR SGLIGAVLRT
PGFKHEEAAI AKRAQELLDY VGIGKYAEFK ARTLSYGDQR RLEIARALAT EPKLIALDEP
AAGMNATEKV VLRELIDRIR KDGRTILLIE HDVKLVMGLC DRVTVLDYGK QIAEGAPADV
QRNEKVIEAY LGAGHKTH
|
|---|
| |