Gene Mpe_A1125 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMpe_A1125 
Symbol 
ID4784607 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylibium petroleiphilum PM1 
KingdomBacteria 
Replicon accessionNC_008825 
Strand
Start bp1203199 
End bp1203975 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content66% 
IMG OID640089688 
Productputative ABC transporter ATP-binding protein 
Protein accessionYP_001020321 
Protein GI124266317 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0411] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.334087 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.177035 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGAACA CCGTTCTCCG CGTAGCCAAC GTGTCCAAGC GCTTCGGCGG CCTGCAGGCC 
CTGAGCGACG TGGGCATCAC CATCGACCGC GGCCAGGTCT ATGGCCTGAT CGGCCCCAAC
GGCGCCGGCA AGACCACCTT CTTCAACGTC ATCACCGGCC TGTACACGCC GGACTCCGGC
GTGTTCGAAC TCGAGGGCAA GGCTTACAAG CCAAGCGCGG TGCACGAGGT CGCCAAGGCC
GGCATCGCAC GCACCTTCCA GAACATCCGG TTGTTCGCCG ACATGACCGC GCTTGAGAAC
GTGATGGTCG GGCGCCACAT CCGCACCAGG TCGGGGCTGA TCGGCGCGGT GTTGCGCACG
CCGGGCTTCA AGCACGAAGA AGCGGCCATC GCGAAGCGCG CCCAGGAACT GCTCGACTAC
GTGGGCATCG GCAAGTACGC CGAGTTCAAG GCGCGCACGC TGAGCTACGG GGACCAGCGT
CGGCTGGAGA TCGCCCGCGC GCTGGCCACC GAACCCAAGC TCATCGCGCT CGACGAGCCG
GCCGCGGGAA TGAACGCGAC GGAGAAGGTG GTGCTGCGCG AGCTGATCGA CCGCATCCGC
AAGGACGGCC GCACCATCCT GCTGATCGAG CATGACGTGA AGCTGGTGAT GGGGCTGTGC
GATCGCGTGA CGGTGCTCGA TTACGGCAAG CAGATCGCCG AAGGCGCGCC GGCCGACGTG
CAGCGCAACG AGAAGGTGAT CGAGGCCTAT CTGGGCGCCG GTCACAAGAC CCATTGA
 
Protein sequence
MTNTVLRVAN VSKRFGGLQA LSDVGITIDR GQVYGLIGPN GAGKTTFFNV ITGLYTPDSG 
VFELEGKAYK PSAVHEVAKA GIARTFQNIR LFADMTALEN VMVGRHIRTR SGLIGAVLRT
PGFKHEEAAI AKRAQELLDY VGIGKYAEFK ARTLSYGDQR RLEIARALAT EPKLIALDEP
AAGMNATEKV VLRELIDRIR KDGRTILLIE HDVKLVMGLC DRVTVLDYGK QIAEGAPADV
QRNEKVIEAY LGAGHKTH