| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A1123 |
|---|
| Symbol | |
|---|
| ID | 4784605 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylibium petroleiphilum PM1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008825 |
|---|
| Strand | + |
|---|
| Start bp | 1201060 |
|---|
| End bp | 1202067 |
|---|
| Gene Length | 1008 bp |
|---|
| Protein Length | 335 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640089686 |
|---|
| Product | putative amino-acid transmembrane ABC transporter protein |
|---|
| Protein accession | YP_001020319 |
|---|
| Protein GI | 124266315 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.121709 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.109582 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGCTAGACA TCGCAAACGC GGCCTACCGG CCGCTCGGCG GTGCAGCGGT GCTGATCCAC
AGCGCCCTAC AGGGAGACCT CACGATGGAC ATCTTCATCC AGCAGATCAT CAACGGCCTG
GTGCTCGGGA GCATGTACGC TCTCGTCGCG CTGGGCTACA CGATGGTCTA CGGCATCATC
AACCTGATCA ACTTCGCCCA TGGCGAGGTG CTGATGGTGG GCGCGCTCAC CAGCTGGACG
GTCGTCACGG TGCTGGCCGC CGCCGGCCTC CCGGGCTGGC TGCTGCTGCT GATCTCGCTG
GTGGCGGCCA TCATCGTGTG CTCCGCGCTC AACTTCGCGA TCGAGAAGAT CGCCTACCGG
CCGCTGCGCA ACGCGCCGCG CCTGGCGCCT CTGATCACCG CCATGGGCAT GAGCCTGCTG
CTGCAGACGC TGGCGATGAT CATCTGGAAG CCCAACTACA AGCCCTATCC CATCCTGCTG
CCCAGCGAAC CGTTCAACGT GTTCGGTGCG GTGATCAACA CCACGCAGAT CCTGATCCTG
GTCGTCACCG CGCTCACGCT GGCCGGCCTG ATGTTCCTCG TCAACAAGAC CAAGCTCGGC
CGCGCGATGC GCGCCACCGC CGAGAACCCG CGCGTCGCCG GCCTGATGGG CGTGCGGCCC
GACACGGTGA TCTCGGCCAC CTTCGTCATC GGCGCCGCGC TGGCCGCGCT GGCCGGCGTG
ATGTACGCAG CCAACTATGG CTCGGTGCAG CACACGATGG GTTTCCTGCC CGGCCTGAAG
GCCTTCACGG CGGCGGTGTT CGGCGGCATC GGAAACCTGC CGGGTGCGAT GGTCGGTGGC
GTGCTGCTGG GCCTGATCGA GTCGATCGGC TCCGGCTACA TCGGCCAGCT CACCGGCGGT
GTGCTGGGCA GCCACTACCA GGACATCTTC GCCTTCATCG TGCTGATCCT CGTGCTGACG
CTCAGGCCCC AGGGCCTGCT CGGCGAGCGC GTGGCGGACC GGGCCTGA
|
|---|
| Protein sequence | MLDIANAAYR PLGGAAVLIH SALQGDLTMD IFIQQIINGL VLGSMYALVA LGYTMVYGII
NLINFAHGEV LMVGALTSWT VVTVLAAAGL PGWLLLLISL VAAIIVCSAL NFAIEKIAYR
PLRNAPRLAP LITAMGMSLL LQTLAMIIWK PNYKPYPILL PSEPFNVFGA VINTTQILIL
VVTALTLAGL MFLVNKTKLG RAMRATAENP RVAGLMGVRP DTVISATFVI GAALAALAGV
MYAANYGSVQ HTMGFLPGLK AFTAAVFGGI GNLPGAMVGG VLLGLIESIG SGYIGQLTGG
VLGSHYQDIF AFIVLILVLT LRPQGLLGER VADRA
|
|---|
| |