| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A1105 |
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| Symbol | rimM |
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| ID | 4784587 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008825 |
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| Strand | + |
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| Start bp | 1183309 |
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| End bp | 1183890 |
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| Gene Length | 582 bp |
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| Protein Length | 193 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640089668 |
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| Product | 16S rRNA-processing protein RimM |
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| Protein accession | YP_001020301 |
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| Protein GI | 124266297 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0806] RimM protein, required for 16S rRNA processing |
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| TIGRFAM ID | [TIGR02273] 16S rRNA processing protein RimM |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCTCGACG ACGAGGTCGT CTGGCCCGAG GATGCCATCG AGGTCGGGCG CATCGTCGAT
GCCTGGGGGA TCAAGGGGGG CATCAAGGTG CTGCCCTTCT CCAGCGATCC CCAGGCGCTG
TTCTCGTCGC GCCGCTGGTT CCTGCGGCCG CCCGAGAAGC CCATGGGGCC GAAGGCGGCC
AAGCCGCTGC CGACGCTGCT GCGCATCACG AACGCCCGCG AGCAGGGTGA TGTGATCGTG
GCTACCGCTC AGGATGTCGC AGACCGCAAC GCCGCCGAGG CCCTGCGGGG CTGCAGCGTG
TTCGTGTCGC GCGCAAGCTT TCCCACTGCC GACGTCGACG AGTATTACTG GATCGACCTG
ATCGGGCTGG CTGTCGTCAA TCGCGAAGGG CAGGCTCTGG GCAATGTGGC CGACCTGCTG
GACACAGGGG CGCACAGCGT GCTGCGCGTC ACCCAGGTCG AGACGGATGA CCAGGGCCGG
TCGCTGGAAC GCGAGCGGCT CATTCCCTTC GTCGCGGCCT ACATCGACGC GGTGAGCCTT
GAGCAGCGTT GCATCACGGT TGACTGGGGT CTCGATTTCT GA
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| Protein sequence | MLDDEVVWPE DAIEVGRIVD AWGIKGGIKV LPFSSDPQAL FSSRRWFLRP PEKPMGPKAA
KPLPTLLRIT NAREQGDVIV ATAQDVADRN AAEALRGCSV FVSRASFPTA DVDEYYWIDL
IGLAVVNREG QALGNVADLL DTGAHSVLRV TQVETDDQGR SLERERLIPF VAAYIDAVSL
EQRCITVDWG LDF
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