| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A1041 |
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| Symbol | |
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| ID | 4785644 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008825 |
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| Strand | - |
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| Start bp | 1110956 |
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| End bp | 1112311 |
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| Gene Length | 1356 bp |
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| Protein Length | 451 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640089603 |
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| Product | type I secretion outer membrane efflux protein |
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| Protein accession | YP_001020237 |
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| Protein GI | 124266233 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01844] type I secretion outer membrane protein, TolC family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCCAGC GTTCCCCGCA CTGCCCGCCG TCGCCGCTGC CGCGGCGGCA CCGCCTGGCC
CGGGCGCTGA CGGCCGGTCT GCTGCTCGGT GCCGCCGCGG TGGCGCAGGC TCAGAGCCTG
CAGTCGCTGT ACGACGCCGC ACGCGGCTAC GACGCCAGCT ACCTGGCGGC CCGCGCGCTG
GCCGATTCGG CACAGTTCCG CTACGAGCAG GTGAAGGCGC TCAACCGCCC GAGCGTGGCC
CTGTCGGCGA GCACCACCCG CAGCGAGACC GACACATCGG CCGGCAGCGC GAGCGGCACC
AGCACCGGCG CGCAGATCTC GGCGCTGCAA CCGCTGTTCA ACCGCAGCAA CAGCAGCACG
ATCGATCAGG CCGAGAAGAG CTATGCGGTG TCGATGGCCG ACCTCGAGAG CGCCGAGCAG
GACCTGGTGG TGCGGCTGAG CCAGGCCTAC TTCGACGTGC TGGCGGCACA GGACACGCTG
GCGACGACAC GCGCCAACAA GACCGCCATC GCCGAGCAGC TGGCCTCGGC GAAGCGCAAT
TTCGAGGTCG GCACCGCAAC CATCACCGAC ACGCGCGAAG CGCAGGCCCG CTACGACCTC
GCCACCGCGC AGGAGATCGC CGCCGAGAAC GACCTGCGCG TACGGCGCAT CGCACTCGAC
CAGCTCGTCG GGCGCACCGA CGTCGAACCG CGGCCGCTGA CGGTCCCGGT GCAGCTGCCC
GAGGTGCTGC CGGCCAACGT GGAGGACTGG GTGACGCAGG CGGGCCAGTC GCCCAGCGTG
CGCAAGGCCC AGCTGGCCTA CGAGGTGGCG CAGCTCGAGA CCGAGAAGGC GCGTGCCGGC
CACCTGCCGA CAGTCGACCT GGTGGGCGGC GTCGGCCGCA ACCGCAACAC CGGCCGCACC
GCCGGCAGCG GTCTGAGCGG CAGCACCACC AGCGCGCAGA TCGGCGTGGA GCTGAACCTG
CCCCTGTTCG CCGGCTACTC GATCCAGAAC CGCGTGAAGG AAACGCTGTC GCTGGAGGAG
AAGTCGCGCA ACGACCTGGA GTTCGCGCGC CGCAGCGTCA CCCAGGGCAC GCGCCAGGCC
TACTTCACCG TCCAGTCGGG CCTGGCCACG GTGAAGGCCC TCGAAGCCGC CGAGGCCTCC
AACAAGCTCG CGCTCGAGGC CACCCAGCTC GGCTACAAGG TCGGCGTGCG CGTCAACCTC
GACGTGCTGA ACGCGCAGAC GCAGCTCTAC ACCACCCAGC GCGACCTGGC GCGCGCCCGC
TACGACGTGG TGCTGGGCAA CCTGCTGCTG CGCCAGGCGG CGGGCACGCT CAAGCCCGAC
GACGTGGGCA GCGTCAACCG GCTGCTCGCG CCCTGA
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| Protein sequence | MPQRSPHCPP SPLPRRHRLA RALTAGLLLG AAAVAQAQSL QSLYDAARGY DASYLAARAL
ADSAQFRYEQ VKALNRPSVA LSASTTRSET DTSAGSASGT STGAQISALQ PLFNRSNSST
IDQAEKSYAV SMADLESAEQ DLVVRLSQAY FDVLAAQDTL ATTRANKTAI AEQLASAKRN
FEVGTATITD TREAQARYDL ATAQEIAAEN DLRVRRIALD QLVGRTDVEP RPLTVPVQLP
EVLPANVEDW VTQAGQSPSV RKAQLAYEVA QLETEKARAG HLPTVDLVGG VGRNRNTGRT
AGSGLSGSTT SAQIGVELNL PLFAGYSIQN RVKETLSLEE KSRNDLEFAR RSVTQGTRQA
YFTVQSGLAT VKALEAAEAS NKLALEATQL GYKVGVRVNL DVLNAQTQLY TTQRDLARAR
YDVVLGNLLL RQAAGTLKPD DVGSVNRLLA P
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