| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A1004 |
|---|
| Symbol | |
|---|
| ID | 4787180 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylibium petroleiphilum PM1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008825 |
|---|
| Strand | + |
|---|
| Start bp | 1067383 |
|---|
| End bp | 1068444 |
|---|
| Gene Length | 1062 bp |
|---|
| Protein Length | 353 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640089566 |
|---|
| Product | putative vanillate O-demethylase oxygenase subunit A |
|---|
| Protein accession | YP_001020201 |
|---|
| Protein GI | 124266197 |
|---|
| COG category | [P] Inorganic ion transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG4638] Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.413289 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAGCAGA AGATCGAATT GAAGCAGTCC TACCTGACCA ACGCCTGGTA CGTGGCGGCG
CTGTCCACCG AGGTGGGAGC GCAGGCGCTG TTCCACCGCA AGATCCTGGA CACCTCGATC
CTGATCTACC GCAAGCAGGA CGGCACGGCG GTGGCGCTGC ACGACCGCTG CCCGCACCGC
TTCGCGCCGC TGCACCTGGG CAAGCGGATC GGCGACGAGG TGGCGTGCCT GTACCACGCG
CTGCAGTTCG ACTGCACGGG GCAGTGCACG AAGAACCCGC ACGGCAACGG GCAGATCCCG
AAGGCGGCGA AGGTGCGCAG CTTCCCGCTG GAGGAGCGCT ACGGATTCCT GTGGATCTGG
ATGGGCGAGG ACGCGCCGGA CCTGGCACGG CTGCCGGACT TCGGCGAGCT CGACAAGGGC
CCCGACACCG GCGTCGCCTT CACCTACATG CACATGAAGG CGAACTACGA GCTGATCATC
GACAACGTGA TGGACCTGAG CCACGTCGAC CACGTGCACG GCGAGATCAT CACCACGCGC
GGGCAGCTGT CGCCGCAGAT TCCGAAGCTG CGCGAGGGCA CCGAGTCGGT CGCGGCGCGC
TGGGAATGGC AGCAGACGCC GCCGCTGCTG ATCCTGGCGG ACTTCCTGCC CGAACCGAAG
ACGCAGGCCC GGCACTTCAT CGAGGTGAGC TGGAGCCCGC CGGCCAACAT CCAGCTCTCG
GTCGGTGCGA CGCAGAACGA CGGCGCGCTC GACCTGGTCA ACTGCATCGG CCAGTACGAC
CTGCACACCT GCACGCCGGA GACTGCGAAC ACCACGCACT ACTTCTTCGC CACACGGCGC
AACCACGTCG TCGACGACGC GGGCTACAAC GCGGCCAAGA TCCAGGCCAT GCACACCGCC
TTCGAGACCG AGGACGGCCC GATCATCCAG GCCATCCACA ACGAGATGGA CACCACCGAC
TTCTTCGGCC TGAATCCGGT GCTGATGACG AACGACGTCG CGCCGGTGAA GGTGCGACGC
CTGCTGCAGC GGCTGATCGA GCAGGAGGCC GGCGCGCGCT GA
|
|---|
| Protein sequence | MEQKIELKQS YLTNAWYVAA LSTEVGAQAL FHRKILDTSI LIYRKQDGTA VALHDRCPHR
FAPLHLGKRI GDEVACLYHA LQFDCTGQCT KNPHGNGQIP KAAKVRSFPL EERYGFLWIW
MGEDAPDLAR LPDFGELDKG PDTGVAFTYM HMKANYELII DNVMDLSHVD HVHGEIITTR
GQLSPQIPKL REGTESVAAR WEWQQTPPLL ILADFLPEPK TQARHFIEVS WSPPANIQLS
VGATQNDGAL DLVNCIGQYD LHTCTPETAN TTHYFFATRR NHVVDDAGYN AAKIQAMHTA
FETEDGPIIQ AIHNEMDTTD FFGLNPVLMT NDVAPVKVRR LLQRLIEQEA GAR
|
|---|
| |