| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A1002 |
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| Symbol | |
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| ID | 4787178 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008825 |
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| Strand | - |
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| Start bp | 1064436 |
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| End bp | 1066148 |
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| Gene Length | 1713 bp |
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| Protein Length | 570 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640089564 |
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| Product | phenol-degradation regulator |
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| Protein accession | YP_001020199 |
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| Protein GI | 124266195 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCCCCA CCACCCACGC GGCGCCATCG GCGACGGTCC GCGCCGACGG ACCGGACGAC
CGCACGCTCA CCGAGCACCT GCGTTTCTCG CCCGACGCCG GCCACATCGT GCTGTTCGAG
CAGCGCATGC TGCTGATGCA CGCGTCGTCG TTCGCCGAGC TGCGGCGCGA GCTCATCGAA
CAGCTGGGCA CCGGCAAGGC GCGCGAGCTG TTCACGCGGC TCGGCTACCA GCAGGGCTTC
GAGGACGGCC AGCGCCTGCG CGCCCTGTGC GGCACGGACC GTGACCGCAT GCTCGAGCTC
GGCCCGCGCC TGCGCGAGAT CGAAGGCTTC GTGCGCAACC AGCCGATCGA CGCTATGCAG
TTCGACCTCG AAGGCGGCGA GTTCTGGGGC GACTACTACT GGACCTCCTC CTGGGAGGCC
GAAGCCCACC TCAAGCACTG CGGCGTGTTC GGCGAACCGG CCTGCTGGAT GATGGTGGGC
TATGCGAGCG GCTGCTGCAC CGCCATCCTC GGGCAACCGG TGCTGTGGCG CGAGATCGAG
TGCGTGGCGA TGGGCCACGA GCGCTGCCGC GTGGTCGGTC GCCCGCTCGC CGCCTGGGAC
GACCTGAGCG AGCACGAGAC CAACTTCCTG AAGATCGAGT CCTTCGTGCG CACGCCACCG
AAGGCCCGGC CGACCCGCAG TGCGCCGGCC AAGGTCTGCG TCCCGGGCGA GTTCGACGAC
TTCGTCGGCA CCTCGGCCGG CTTCAACGCG GTGGCCAACC TGGTCCGCCG TGTCGGTGTG
ACCGACTCCA CCGTGCTGTT CCGCGGCGAG AGCGGCGTCG GCAAGGAGCG TTTCGCACGG
GCGCTGCATT CGGTCAGCCG CCGGCACGAG CAGCCGATGG TGTCGATCAA CTGCGCGGCG
ATTCCGCCCG ATCTGGTGGA ATCCGAGCTG TTCGGTGTCG AGAAAGGTGC CTTCACCGGA
GCCGACCATT CGCGGCCCGG ACGCTTCGAG CGGGCCCACG GCGGCACGCT GTTCCTCGAC
GAGATCAGCA GCCTGCCGCT GCCGGCGCAG GGCAAGCTGC TGCGCGTGCT GCAGGAGCGC
GAGATCGAGC GCGTGGGCGA CGTGCGCGTG CGCAAGGTCG ACGTGCGACT GGTCGCGGCG
TCCAACCGCG ACCTGCGCGA CGAGGTCGAG GCCGGCCGAT TCCGCGAGGA CCTGTTCTAC
CGGCTCAACG TGTTCCCGAT CGTCATTCCG CCGCTGCGCG AGCGCCTGGA GGACATCCCG
CTGCTCGTCG CACTGTTCCT GGAACGTTGC AACCGGCGCT GCGGCAAGCG CGTCGCCGGC
CTGACCACGC GCGCCTACGA CGCGCTGTGG GACTACCACT GGCCCGGCAA CGTGCGCGAG
CTCGAGAACA TGGTCGAGCG CGCGGTGATC CTGGCCGACG ACGACGGCAA GATCGACGTG
CAGCACCTGT TCTCCGGCGG CGAGCAGCTC AAGCTGCGTT CGCTGAGCGT GGGCGCGCAC
GGCGAGCTGG TCCCGCGCGC CGGCGAGGCC AGCGACCAGT GCAAGCGACT GGCCGACGAC
CTGCTGGCCC GCCTGCCGTC CTTCGAGCAG ATCGAGTCGC TGCTGTTCGA GCGCGCGATG
GAGCGCAGCG ACGGCAACAT CTCCGCGGCC GCGCGCCTGC TGCGCCTGCG GCGCGGCCAG
GTCGAATACC GCCTCAAGAA GCGCGAGTCC TGA
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| Protein sequence | MPPTTHAAPS ATVRADGPDD RTLTEHLRFS PDAGHIVLFE QRMLLMHASS FAELRRELIE
QLGTGKAREL FTRLGYQQGF EDGQRLRALC GTDRDRMLEL GPRLREIEGF VRNQPIDAMQ
FDLEGGEFWG DYYWTSSWEA EAHLKHCGVF GEPACWMMVG YASGCCTAIL GQPVLWREIE
CVAMGHERCR VVGRPLAAWD DLSEHETNFL KIESFVRTPP KARPTRSAPA KVCVPGEFDD
FVGTSAGFNA VANLVRRVGV TDSTVLFRGE SGVGKERFAR ALHSVSRRHE QPMVSINCAA
IPPDLVESEL FGVEKGAFTG ADHSRPGRFE RAHGGTLFLD EISSLPLPAQ GKLLRVLQER
EIERVGDVRV RKVDVRLVAA SNRDLRDEVE AGRFREDLFY RLNVFPIVIP PLRERLEDIP
LLVALFLERC NRRCGKRVAG LTTRAYDALW DYHWPGNVRE LENMVERAVI LADDDGKIDV
QHLFSGGEQL KLRSLSVGAH GELVPRAGEA SDQCKRLADD LLARLPSFEQ IESLLFERAM
ERSDGNISAA ARLLRLRRGQ VEYRLKKRES
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