| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A0998 |
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| Symbol | |
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| ID | 4787174 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008825 |
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| Strand | - |
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| Start bp | 1059410 |
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| End bp | 1060945 |
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| Gene Length | 1536 bp |
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| Protein Length | 511 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640089560 |
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| Product | PleD |
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| Protein accession | YP_001020195 |
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| Protein GI | 124266191 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.684124 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGATA TCCCTGTTCC CGAACGCAGC GGCTCGATGA CCCCGACGAT GCTCTCCCCG
CAAACGAACA CGCAGGCCGA CCGACCGCCG GCATGGTGGG TCTACCTGCT GCTGCCCTTG
CTGCATTTCG CCAGCGTCAA GCTGACCTTC CTGTGCGCCG TGTCGCCCGA GAACGAGGTG
GTGATCTGGC TGCCCAACGC CGTGCTGCTG GCAGCGCTGC TCCACTTCCG CGGCCGGCGC
GGCGGCTGGC TAGCCCTGCT GACGTTCAGT TCCGACGTGC TCGCCAACCT GCCGGTGTTC
CCGCCGCTGC AGGCGGTGCT GCTGAGCCTC GTCAACCTCA CGGAAGTGAC GCTGGCCTAC
CTGCTGCTGC GCCGCGCAGG CACGTCGCCG GCGTTGGACC GGATCCAGGA CCTGGGCAAG
TTCGTCGTCA TCGGCCCGCT GCTCTGCGCG CTCGTCGCCG CGCTGCTGGC GAGTCTGGTG
CTGCAGGCGA TGGACGGCGT GAAGACGCCC TATCCCACGC TGGTGCTGCT GTGGTGGTTC
GGTGACGGCC TGGGGCTGCT GATCTTCACG CCGATGCTGC TGGCGCTGGC GCAGCCCGCG
CCGGAGCCGA TCCGGCTGCG CTGGCAGGAC GGACCGGTGC TGCTGTTCAC CGGCGCGCTG
GCAGGGCTGA TCCTGTCGGG GCAGTCGGAG CGCTGGAGCG GCGTGCCGCT GACGCCGAAC
CTGCTGCTGC CGCCGATGCT GTACATCGCA GTCCGCTTCG GCACGCGCTG GACCGCGCCG
GCGGTCGCGC TCATCGCGCT GGCGGCCGCC TGGGCCCAGA CCACCGGCCA CAAGCCCTTC
GGCGAGGCCT CGCCGCACGA ACTGATCCTG CGCACCCAGG AGTTCATCCT GACGCTCAGC
ATCGTCGGCA TGGGCTTCGC CACGCTGCTG AGCGAGCAGC GTGCGCTGAC GCGCAGCCTG
GAGGACAAGG TGCGCGAGCG CACCCTGAAG CTGGAGGAGT CCAACAGCCA GCTGGGCACG
CTGAGCACCA CCGATGGCCT GACCGGCATC GCCAACCGGC GGCGCTTCGA CGAGTTCATC
GCCGGCGAAT GGCGCCACGC CCGCGTCACC GGCCAGCCGC TGGCGCTGGC GCTGCTGGAT
GTGGATCTGT TCAAGCATTA CAACGACCGC TACGGCCACC AGGCCGGCGA CGACTGCCTG
CGCACCATCG CGCAGGTGCT CGGCGCCAAC GTGCGCCGCG CCGGCGACCT GGTGGCGCGC
TACGGCGGCG AGGAGTTCGC CCTGGTGGCG GTGGCGGCCG ACGAGGCCAG CGCGCTCGCC
ATGTCGCGCG GCATCTGCCA GGCCCTCGAG GCGCTGGCGC ACCGCCACGA GCTGTCGCCG
TTCGGCGTGG TCACCGCCAG CATCGGCGTG GCGGTGCTGG TGCCCGGCGA GCACGACACG
CACGAGACGC TCATCCGCCG GGCCGACCGG GCGCTCTACC AGGCCAAGGC GAACGGCCGC
AACCAGGCGG TGCTGGCGGG CGACGCCCCG GCCTGA
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| Protein sequence | MADIPVPERS GSMTPTMLSP QTNTQADRPP AWWVYLLLPL LHFASVKLTF LCAVSPENEV
VIWLPNAVLL AALLHFRGRR GGWLALLTFS SDVLANLPVF PPLQAVLLSL VNLTEVTLAY
LLLRRAGTSP ALDRIQDLGK FVVIGPLLCA LVAALLASLV LQAMDGVKTP YPTLVLLWWF
GDGLGLLIFT PMLLALAQPA PEPIRLRWQD GPVLLFTGAL AGLILSGQSE RWSGVPLTPN
LLLPPMLYIA VRFGTRWTAP AVALIALAAA WAQTTGHKPF GEASPHELIL RTQEFILTLS
IVGMGFATLL SEQRALTRSL EDKVRERTLK LEESNSQLGT LSTTDGLTGI ANRRRFDEFI
AGEWRHARVT GQPLALALLD VDLFKHYNDR YGHQAGDDCL RTIAQVLGAN VRRAGDLVAR
YGGEEFALVA VAADEASALA MSRGICQALE ALAHRHELSP FGVVTASIGV AVLVPGEHDT
HETLIRRADR ALYQAKANGR NQAVLAGDAP A
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