| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A0990 |
|---|
| Symbol | |
|---|
| ID | 4787166 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylibium petroleiphilum PM1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008825 |
|---|
| Strand | + |
|---|
| Start bp | 1051690 |
|---|
| End bp | 1052238 |
|---|
| Gene Length | 549 bp |
|---|
| Protein Length | 182 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 640089552 |
|---|
| Product | putative ring oxidation complex protein 3 |
|---|
| Protein accession | YP_001020187 |
|---|
| Protein GI | 124266183 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2151] Predicted metal-sulfur cluster biosynthetic enzyme |
|---|
| TIGRFAM ID | [TIGR02159] phenylacetate-CoA oxygenase, PaaJ subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.190413 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCGCGG TGACGACGGC GCGCGAGGCG GTCGACCGTG ACGACGCCGT GCGTTGCGAG
CAGGCGTGGG CGGCACTGGA CGAGGTGCTC GATCCCGAGG TGCCGGCGCT GTCGGTCTGC
GATCTCGGCA TCGTGCGGGC GGTCCGCGCC GAGGGTGCGG GCCTGGAGAT CGTGCTGACG
CCCACCTACT CGGGCTGTCC GGCCACCGAG GTGATCGAGC ACCAGGTGCG GGCCGCGATC
GACGATGCCG GCCTCGGGCC CGCCCGCGTG ACGCTGCAGC GCGCGCCGGC CTGGACCACC
GACTGGATCA GCGAGGCCGG CCGCCGCAAG CTCGCCGCCT ACGGCATCGC ACCGCCGGGG
CCGTCCGTCC GACCGGACGG TGCGGCGCCG ATCCGCTTCT TCGGCCGCGG CAGACCGGCG
CCCCTGGCCT GCCCGCGCTG CGGCAGCCGC CAGACCGAGC GGCTGTCGGC CTTCGGGTCG
ACCGCCTGCA AGGCGCTGTA CCGCTGCCTG AGCTGCCGCG AGCCGTTCGA GCACTTCAAG
CCGCTCTGA
|
|---|
| Protein sequence | MSAVTTAREA VDRDDAVRCE QAWAALDEVL DPEVPALSVC DLGIVRAVRA EGAGLEIVLT
PTYSGCPATE VIEHQVRAAI DDAGLGPARV TLQRAPAWTT DWISEAGRRK LAAYGIAPPG
PSVRPDGAAP IRFFGRGRPA PLACPRCGSR QTERLSAFGS TACKALYRCL SCREPFEHFK
PL
|
|---|
| |