| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A0987 |
|---|
| Symbol | paaA |
|---|
| ID | 4787133 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylibium petroleiphilum PM1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008825 |
|---|
| Strand | + |
|---|
| Start bp | 1049619 |
|---|
| End bp | 1050620 |
|---|
| Gene Length | 1002 bp |
|---|
| Protein Length | 333 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640089549 |
|---|
| Product | phenylacetate-CoA oxygenase subunit PaaA |
|---|
| Protein accession | YP_001020184 |
|---|
| Protein GI | 124266180 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3396] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR02156] phenylacetate-CoA oxygenase, PaaG subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.473884 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTACACGC AAGCCATGGA CAGCGCGCCG AAGGACGAGC GCCCGGCGGT CCGCTCGGTC
GAGGAGGCGC GGCTCCAGCA GCGCTTCGAC GAGCGCATCG ATGCCGGCGA GTTCATCGAG
GCCAAGGGCT GGATGCCCGA GCACTACCGT CGCACGCTGG TGCGCCAGAT CAGCCAGCAC
GCGCATTCCG AGATCGTCGG CATGCTGCCC GAGGGGAACT GGATCGGTCG CGCGCCCACG
CTCAAGCGCA AGGCGATCCT GCTGGCCAAG GTGCAGGACG AGGGCGGCCA TGGCCTCTAC
CTCTATGCCG CGGCCGAGAC GCTGGGCACA TCGCGCGACC AGCTGCTCGA GGCACTGCAC
AGCGGCCAGG CCAAGTACAG CTCGATCTTC AACTACCCCA CGCTGACCTG GGCCGACATG
GGCACGATCG GCTGGCTGGT CGACGGCGCG GCGATCATGA ACCAGGTGCC GATCTGCCGT
TGCTCCTATG CGCCGTATGC GCGCGCGATG GTGCGCATCT GCCGCGAGGA GAGCTTCCAC
CAGCGCCAGG GCTACGAGGC CCTGCTGACG ATGATGCAGC AGGGCAGCGA CGCGCAACGG
GCGATGGTGC AGGACGCGGT GAACCGCTGG TGGTGGCCGT CGATCATGAT GTTCGGCCCG
CCGGACGACC AGTCGCCGAA CTCGGCGCAG TCGATGCGCT GGGGCATCAA GCGCGTCAGC
AACGACGAGC TGCGGCAGAA GTTCATCGAC GCCGCGGTGG AGCAGGCCCA GGTGCTGGGC
GTCACGCTGC CCGATCCGGC GCTGCGGTGG AACGCCGAGC GCGAGCACTG GGACCACGGG
CCGATCGACT GGAGCGAGTT CAAGCGCGTG CTCGCCGGCG ACGGGCCCTG CAACCGCGAG
CGCCTCGCCG CCCGCGTGCA GGCCTGGGCG GAGGGCGCCT GGGTGCGCGA GGCCGCGCTG
GCGCATGCAC GCAAGCAGGC ACCGAAGGAG GAGGTCGCAT GA
|
|---|
| Protein sequence | MYTQAMDSAP KDERPAVRSV EEARLQQRFD ERIDAGEFIE AKGWMPEHYR RTLVRQISQH
AHSEIVGMLP EGNWIGRAPT LKRKAILLAK VQDEGGHGLY LYAAAETLGT SRDQLLEALH
SGQAKYSSIF NYPTLTWADM GTIGWLVDGA AIMNQVPICR CSYAPYARAM VRICREESFH
QRQGYEALLT MMQQGSDAQR AMVQDAVNRW WWPSIMMFGP PDDQSPNSAQ SMRWGIKRVS
NDELRQKFID AAVEQAQVLG VTLPDPALRW NAEREHWDHG PIDWSEFKRV LAGDGPCNRE
RLAARVQAWA EGAWVREAAL AHARKQAPKE EVA
|
|---|
| |