Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mpe_A0977 |
Symbol | |
ID | 4787123 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylibium petroleiphilum PM1 |
Kingdom | Bacteria |
Replicon accession | NC_008825 |
Strand | - |
Start bp | 1040349 |
End bp | 1041116 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640089539 |
Product | ABC transporter permease protein |
Protein accession | YP_001020174 |
Protein GI | 124266170 |
COG category | [S] Function unknown |
COG ID | [COG1511] Predicted membrane protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.024266 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCATGA ACCTGCACGC GGTGCGCGCG ATCTACCGCT TCGAGATGGC GCGCGCGTGG CGCACGCTGA TGCAGAGCGT GATCTCGCCA GTGATCTCCA CCTCGCTGTA CTTCGTGGTG TTCGGTGCGG CGATCGGCGC GCGCATTCCC GAAGTGGACG GCGTCAGCTA CGGCGCCTTC ATCGTGCCGG GGCTGGTGAT GCTGTCGCTT CTGACGCAGA GCATCTCGAA CGCCTCGTTC GGCATCTACT TTCCCAAGTT CACCGGCACG ATCTACGAGC TGCTGTCGGC GCCGGTCTCG GCCTTCGAGA TCGTGCTGAG CTACGTGGGC GCCGCGGCCA CCAAATCGGT CGTGCTCGGG CTCATCATCC TGGCCACCGC CTGGCTGTTC GTGCCGCTGC GCATCGAGCA CCCGGTCTGG ATGCTGCTGT TCCTGGTGCT GACGGCGGTG ACCTTCAGCC TGTTCGGCTT CATCATCGGC ATCTGGGCCG ACGGCTTCGA GAAGCTGCAG GTGGTGCCGC TGCTGATCGT CACGCCGCTC ACCTTCCTGG GTGGCAGCTT CTATTCGATC GGCATGCTGC CGCCGTTCTG GCAGACGGTG GCGCTGTTCA ACCCGGTGGT CTACCTGGTG AGCGGCTTCC GCTGGAGCTT CTACGGCACG GCCGACGTGC ACATCGCACT GAGCCTGGGC ATGACCTTCG CTTTCCTCGC CGGCTCGCTG GCCGTCGTGG CCTGGATCTT CCGCACCGGC TACCGGCTGA AGACCTGA
|
Protein sequence | MSMNLHAVRA IYRFEMARAW RTLMQSVISP VISTSLYFVV FGAAIGARIP EVDGVSYGAF IVPGLVMLSL LTQSISNASF GIYFPKFTGT IYELLSAPVS AFEIVLSYVG AAATKSVVLG LIILATAWLF VPLRIEHPVW MLLFLVLTAV TFSLFGFIIG IWADGFEKLQ VVPLLIVTPL TFLGGSFYSI GMLPPFWQTV ALFNPVVYLV SGFRWSFYGT ADVHIALSLG MTFAFLAGSL AVVAWIFRTG YRLKT
|
| |