| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A0970 |
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| Symbol | |
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| ID | 4787116 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylibium petroleiphilum PM1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008825 |
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| Strand | + |
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| Start bp | 1033006 |
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| End bp | 1034358 |
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| Gene Length | 1353 bp |
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| Protein Length | 450 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640089532 |
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| Product | D-glucarate dehydratase |
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| Protein accession | YP_001020167 |
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| Protein GI | 124266163 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only |
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| COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
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| TIGRFAM ID | [TIGR03247] glucarate dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.886707 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCAACA CCTCCTTGTC TTCCACGCCG CGTGTCACCG CGATGCGCGT CATCCCGGTC
GCGGGGCGCG ACTCGATGCT GATGAACCTG AGCGGCGCGC ACGGGCCGTT CTTCACCCGC
AACCTCGTGA TCCTGAGCGA CAACGCCGGG CGGAGCGGCG TCGGCGAGGT GCCGGGCGGC
GAGAAGATCC GCCAGACGCT GGAGGACGCG CGCGAGTGGG TCGTCGGCCA ACCGGTCGGC
GACGTGCAGC GCGTGCTGCG TACGGTGCGC GAGCGCTTCG CCGACCGCGA CGCCGGCGGC
CGCGGGCTGC AGACCTTCGA CCTGCGCACC ACCATCCACG TCGTGACGGC CGTCGAGTCG
GCGCTGCTCG ACCTGCTGGG CCAGCACCTC GAGCTGCCGG TCGCGGCGCT GCTCGGCGAG
GGCCAGCAGC GCACGTCGGT CGAGATGCTC GGCTACCTGT TCTTCGTCGG TGACCGCACG
AAGACCGACC TGGCCTACGC GGGCCCGGCC GACGAGGCGA CCGACGCCGA CGACTGGCAG
CGCCTGCGCC ACGAGCCGGC GATGACGCCC GAGGAGGTGG TGCGGCTGGC GGAGGCGGCG
CGCGCGCGCT ACGGCTTCAA CGACTTCAAG CTCAAGGGCG GCGTGCTGGC CGGCGACGCC
GAGGTCGACG CGGTCACCGC GATCCACGAG CGCTTCCCCG ACGCCCGCGT GACGCTCGAT
CCCAACGGCG GCTGGCTGCT CAAGGACGCG ATCCGCCTCG GCCAGCGCAT GCGCGGCGTG
GTGGCCTACG CCGAGGACCC CTGCGGTGCG GAAGAGGGCT ACTCCGGCCG CGAGGTGATG
GCCGAGTTCC GCCGCGCCAC CGGCCTGCCG ACCGCGACCA ACATGGTCGC CACCGACTGG
CGCCAGCTCA CGCACGCGCT GTCGCTGCAG TCGGTCGACA TCCCGCTCGC CGATCCGCAT
TTCTGGACGA TGGCCGGCTC GGTGCGCGTG GCGCAGACCT GCCGCGACTG GGGCCTGACC
TGGGGCTCGC ACTCGAACAA CCACTTCGAC GTCTCGCTGG CGATGTTCAC CCACGTCGGT
GCCGCGGCGC CGGGCCGCGT GACCGCGATC GACACGCACT GGATCTGGCA GGACGGACAG
CGCCTGACGA AGGAGCCGCT GCAGATCGTC GGTGGCCACG TGCGGGTGCC GCAGCGGCCG
GGCCTGGGCA TCGAGCTCGA CATGGCCGAG GTCGAGAAGG CCCACCGCCT CTACCTCGAG
CACGGCCTGG GCGCGCGCGA CGACGCGGTG GCGATGCAGC ACCTGATCCC GAACTGGCGC
TTCGATCCAA AACGGCCCTG CATGCTGCGC TGA
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| Protein sequence | MLNTSLSSTP RVTAMRVIPV AGRDSMLMNL SGAHGPFFTR NLVILSDNAG RSGVGEVPGG
EKIRQTLEDA REWVVGQPVG DVQRVLRTVR ERFADRDAGG RGLQTFDLRT TIHVVTAVES
ALLDLLGQHL ELPVAALLGE GQQRTSVEML GYLFFVGDRT KTDLAYAGPA DEATDADDWQ
RLRHEPAMTP EEVVRLAEAA RARYGFNDFK LKGGVLAGDA EVDAVTAIHE RFPDARVTLD
PNGGWLLKDA IRLGQRMRGV VAYAEDPCGA EEGYSGREVM AEFRRATGLP TATNMVATDW
RQLTHALSLQ SVDIPLADPH FWTMAGSVRV AQTCRDWGLT WGSHSNNHFD VSLAMFTHVG
AAAPGRVTAI DTHWIWQDGQ RLTKEPLQIV GGHVRVPQRP GLGIELDMAE VEKAHRLYLE
HGLGARDDAV AMQHLIPNWR FDPKRPCMLR
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