| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A0966 |
|---|
| Symbol | |
|---|
| ID | 4787112 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylibium petroleiphilum PM1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008825 |
|---|
| Strand | + |
|---|
| Start bp | 1027116 |
|---|
| End bp | 1028207 |
|---|
| Gene Length | 1092 bp |
|---|
| Protein Length | 363 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | 640089528 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001020163 |
|---|
| Protein GI | 124266159 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4447] Uncharacterized protein related to plant photosystem II stability/assembly factor |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.254365 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTCCAT CGCGCTCGTT GATCGCGCTC ACCGCGGCGC TGTGCCTGGC GGTCGCCGCC
GCCGTGCCGG TCGGCGCTGC CGGCACCGCG GCACCGCGCT TCGGCGTGCT GCAGCAGGCC
GCGCTGCAGT CGCCGCGGGC GCTGTCGGCC ACGATGCTCG CGGTGGCGGC CGCCGGGAAG
CGACTGGTCG CCGTTGGCGA GCGCGGCATC GTGCTGCTGT CCGACGACGG CGGCGCCCGC
TGGCGCCAGG CGGCCACCCC CGTGCGGGCC AGCCTGACGG CGGTGCAGTT TGTCGACGAA
CGGCAGGGCT GGGCCGTCGG CCACCTCGGC GTCGTGCTGC ATTCCGGCGA CGGCGGCGAA
ACGTGGACCA AGCAGCTCGA CGGGCTGCAG CTGCCGGCGC TGTTCGAGCA GGCGGCACGC
GCCGACGCGG CCGCCGCGCC GGCCTACCGC GACTACGTCC AGCTGCTTGC CGACGACGGC
CCCGACAAGC CGCTGCTCGC GCTGCACTTC CAGGACGCTC GGCGCGGCAT CGTCGTCGGC
GCCTACAACC TCGCGCTCGG CACGGAGGAC GGTGGCGCCA CCTGGACGCC GCTGAGCGCT
CGACTGCCCA ACCCGCGCTC GCTGCACCTC TACGGCGTCG CGGTCAGCGG CGCCTCGATC
GTGCTGGCCG GCGAGCAGGG CCTGCTGCTG CGCTCCGACA ACGGCGGCCG TGATTTCGCC
GCGCTGGAGT CGCCCTACCG GGGCAGCTGG TTCGGCCTGC TGGCCACCCG CGGCGACCGC
CTGCTGGTCT ACGGACTGCG CGGTGCGGCC TACGTGTCGG CCGACCGCGG CTCGAGCTGG
ACCCAGGCGA GCACCGAGCT GCCCGTCTCG ATCAGCGGCG CGGCCGAACT GGCCGATGGC
ACGCTCGTGC TCGGCAGCTC GGCCGGCGAC CTGCTGGTCA GCCGTGACCA GGGGCGCAGC
TTCCAGCGCC GCGACGGACC GCCCCAGCCG CCGATCGCCG GCCTGGTGCC CACGCAGGAC
GGCGCCCTCG CACTGGCCGG GCTGCGGGGT CCGCAGCGCG TGGACCTGGC TGCCCCGCCC
GCCGCCCGCT GA
|
|---|
| Protein sequence | MSPSRSLIAL TAALCLAVAA AVPVGAAGTA APRFGVLQQA ALQSPRALSA TMLAVAAAGK
RLVAVGERGI VLLSDDGGAR WRQAATPVRA SLTAVQFVDE RQGWAVGHLG VVLHSGDGGE
TWTKQLDGLQ LPALFEQAAR ADAAAAPAYR DYVQLLADDG PDKPLLALHF QDARRGIVVG
AYNLALGTED GGATWTPLSA RLPNPRSLHL YGVAVSGASI VLAGEQGLLL RSDNGGRDFA
ALESPYRGSW FGLLATRGDR LLVYGLRGAA YVSADRGSSW TQASTELPVS ISGAAELADG
TLVLGSSAGD LLVSRDQGRS FQRRDGPPQP PIAGLVPTQD GALALAGLRG PQRVDLAAPP
AAR
|
|---|
| |