| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpe_A0965 |
|---|
| Symbol | |
|---|
| ID | 4787111 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylibium petroleiphilum PM1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008825 |
|---|
| Strand | + |
|---|
| Start bp | 1025627 |
|---|
| End bp | 1027018 |
|---|
| Gene Length | 1392 bp |
|---|
| Protein Length | 463 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640089527 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001020162 |
|---|
| Protein GI | 124266158 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0447292 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAGACCG GCATGAACAA GACCCCCAAG ATTTCGTTCG CCGTCGCGCT CGCGCTGGCA
TCCCTCGCCG CGCAGCCGGT GCTCGCTGCG GTGAGCGCCG AAGAAGCCGC CAAGCTCAAG
ACCACGCTCA CGCCGCTGGG CGCCGAGAAG GCCGGCAACG CCGACGGCTC GATCCCGGCC
TGGGACGGCG GCTACACCAA GGTCGCGCCG GGCTGGAAGA ACGGCCAGCC GAGACCCGAT
CCGTTCGCGG CGGAGAAGCC GGTGGCGTCG ATCTCGGCCA AGAACGCCGC GCAGTACGAC
GCCCGGCTGA GCGAGGGCGT CAAGACGCTG ATGAAGAAGT ACCCCGACTT CCGCATCGAC
GTGTACCCGA CGCACCGCAG CGCGGCCGCG CCGGCCTGGG TGTACGAGAA CACCTTCAAG
AACGCGACCT CCGCGAAGGT GGCCGACAAC GGCTACGGCG TGGTCGACGC CTACGGCGGC
ATCCCGTTCC CGATTCCCAA GACCGGCATC GAGGTGATGC TCAACGCGCG GCTGGCCTGG
GAGGGCGTGG CACAGAAGTA CCAGCTCAAC ACCTGGGTGG TCACCGGCGA CGGGCACCGC
ACGCTGTCGT CGGCCGGGCT GATGTCGTGG TTGTGGCCGT ACTACTACAA GGATGCGCGC
GACAGCTACC TGGCCAAGCC GACCCATTAC AAGATGGGGT CCTTCGTCAA GTCGGATCCG
TCGGCGGTGG CCGGTGAAGT GATCCTGCTG CACGAGACCG TGAACGAGGA GAAGGTGCCG
CGTGGCGTGT GGCAGTACCT GGTGGGCCAG CGCCGCGTGC GCAAGGCACC CTCGATCGCC
TACGACACGC CGGACACCGT GACCTCGGGC ACCGGGCTGT TCGACGAGTC CTTCGGCACC
ATGGGCCCGA TCGACCGTCA CGAGTACAAG ATCGTCGGCA AGCAGGAGAT GTACATCCCG
TACAACTCCA ACAAGACGGC GCTGGCCAAG GTCGACGAGC TGGTGACGCC GAAGTTCCTC
AACCCCGACC ACGTGCGCTG GGAGCTGCAC CGCGTTTGGG TCGTCGAGGC GACGCTGCTG
CCCGGCAAGC GCCACGTGAT GACCAAGCGC CGCTACTACA TCGACGAGGA CGGCTGGAAG
ATGGTCATGG CCGACCACTG GGACGCGCAG GGCCAGCTCT ACCACCTGCA GTACACGCTG
CCCTACCTGG CGCCCGACAT CCCCGCCGTC GTGAGCACGG TGCAGTGGGG AATCATCAAC
CTGCTGACGG GCCAGTACTA CTACAACTGC AACTTCAACG ACCTGCCGCA GCACTTCCCC
GTGCCCGAAG TGCCGAAGCA GCTCAACGAA GCCATGTTGA GCCCCGAGGC CATCGCCACC
GGGGCGCGCT GA
|
|---|
| Protein sequence | METGMNKTPK ISFAVALALA SLAAQPVLAA VSAEEAAKLK TTLTPLGAEK AGNADGSIPA
WDGGYTKVAP GWKNGQPRPD PFAAEKPVAS ISAKNAAQYD ARLSEGVKTL MKKYPDFRID
VYPTHRSAAA PAWVYENTFK NATSAKVADN GYGVVDAYGG IPFPIPKTGI EVMLNARLAW
EGVAQKYQLN TWVVTGDGHR TLSSAGLMSW LWPYYYKDAR DSYLAKPTHY KMGSFVKSDP
SAVAGEVILL HETVNEEKVP RGVWQYLVGQ RRVRKAPSIA YDTPDTVTSG TGLFDESFGT
MGPIDRHEYK IVGKQEMYIP YNSNKTALAK VDELVTPKFL NPDHVRWELH RVWVVEATLL
PGKRHVMTKR RYYIDEDGWK MVMADHWDAQ GQLYHLQYTL PYLAPDIPAV VSTVQWGIIN
LLTGQYYYNC NFNDLPQHFP VPEVPKQLNE AMLSPEAIAT GAR
|
|---|
| |